Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012249.1 Corchorus capsularis cultivar CVL-1 contig12270, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22395

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2295--2435
33
4.3
32
80
7
113
26
9
22
41
1.84
2425--2505
33
2.5
33
93
0
135
23
12
18
45
1.83
2425--2530
33
3.3
30
81
13
106
24
10
18
46
1.81
2977--3002
9
2.9
9
100
0
52
34
11
42
11
1.77
5139--5213
30
2.5
31
82
6
100
12
30
30
26
1.92
5874--6653
159
4.9
158
82
5
861
26
22
21
29
1.99
5877--6651
316
2.4
315
82
6
884
26
22
21
29
1.99
7132--7165
2
17.0
2
100
0
68
50
0
0
50
1.00
20801--20872
27
2.7
26
78
4
72
16
12
26
44
1.83

Tables:   1

The End!