Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001225.1 Corchorus capsularis cultivar CVL-1 contig01225, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2204

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1245--1296
25
2.1
25
96
0
95
42
11
5
40
1.65
1335--1431
48
2.0
48
97
0
185
36
23
8
31
1.85
1445--1485
19
2.1
20
90
4
66
41
0
0
58
0.98
1432--1724
145
2.0
146
97
0
552
31
11
12
44
1.78
1814--2061
78
3.2
78
90
2
390
36
13
1
48
1.50

Tables:   1

The End!