Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012251.1 Corchorus capsularis cultivar CVL-1 contig12272, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2272

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
833--889
29
2.0
29
92
0
96
24
19
17
38
1.93
829--997
35
5.0
35
79
13
133
20
18
19
40
1.91
866--998
35
3.8
35
84
2
160
18
18
21
41
1.91
987--1194
70
3.0
70
86
2
278
21
19
21
37
1.94
1410--1642
63
3.8
62
85
8
291
22
20
16
40
1.91
1457--1632
62
3.0
56
86
7
208
23
21
16
38
1.93

Tables:   1

The End!