Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012264.1 Corchorus capsularis cultivar CVL-1 contig12285, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5393

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
212--253
2
21.5
2
85
4
50
40
0
0
59
0.97
1328--1398
36
2.0
36
91
0
115
28
25
30
15
1.96
3182--3280
42
2.4
42
89
0
153
23
13
35
28
1.92
3267--3316
17
3.1
17
85
5
68
30
12
24
34
1.91
3849--3887
20
2.0
20
94
0
69
53
30
7
7
1.57

Tables:   1

The End!