Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012269.1 Corchorus capsularis cultivar CVL-1 contig12290, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28372

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--91
2
43.5
2
100
0
174
0
49
0
50
1.00
1462--1486
4
6.2
4
100
0
50
0
72
0
28
0.86
4219--4265
14
3.5
13
80
16
51
31
0
8
59
1.27
4209--4265
13
4.3
12
79
16
51
29
1
7
61
1.32
10335--10381
14
3.5
13
80
16
51
31
0
8
59
1.27
10325--10381
13
4.3
12
79
16
51
29
1
7
61
1.32
16094--16129
17
2.1
18
94
5
65
0
13
11
75
1.06
23737--23798
31
2.0
31
87
6
90
19
22
22
35
1.96
23802--23895
31
3.0
31
80
6
84
18
24
20
37
1.94
26784--26816
13
2.5
13
95
0
57
33
18
12
36
1.88

Tables:   1

The End!