Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012275.1 Corchorus capsularis cultivar CVL-1 contig12296, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13489

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--91
29
2.5
29
82
6
85
71
9
10
8
1.32
1441--1917
99
4.8
99
77
8
337
22
30
15
31
1.95
1456--1972
49
10.5
49
73
7
307
23
28
16
32
1.96
1446--1972
196
2.7
193
78
6
506
22
29
15
32
1.95
7484--7594
9
13.8
9
68
25
61
34
36
18
9
1.85
7478--7596
16
7.5
16
79
5
134
34
36
19
9
1.84
7477--7596
48
2.5
47
85
6
154
35
36
19
9
1.83
7478--7596
32
3.8
32
87
4
152
34
36
19
9
1.84
10347--10589
119
2.0
120
83
1
299
28
20
11
39
1.88

Tables:   1

The End!