Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012278.1 Corchorus capsularis cultivar CVL-1 contig12299, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32654

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3982--4243
26
9.1
28
66
29
133
41
24
13
19
1.88
3982--4268
58
4.9
58
96
0
538
41
25
13
19
1.88
5087--5186
35
2.9
35
76
4
96
29
31
13
27
1.93
5541--5887
72
4.8
72
87
2
468
23
27
18
29
1.98
6291--6327
19
1.9
19
88
0
56
35
29
13
21
1.92
6671--6708
20
1.9
20
94
0
67
34
13
31
21
1.91
19903--19941
14
3.0
13
89
10
62
2
20
0
76
0.90
24493--24786
145
2.0
145
88
1
437
20
29
31
18
1.96

Tables:   1

The End!