Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012279.1 Corchorus capsularis cultivar CVL-1 contig12300, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13857

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1200--1231
3
10.7
3
100
0
64
65
0
0
34
0.93
6046--6084
3
13.0
3
100
0
78
66
0
0
33
0.92
6342--6388
3
15.7
3
90
0
76
34
2
2
61
1.20
7200--7274
33
2.3
33
90
4
116
9
28
42
20
1.82
9178--9213
6
6.0
6
100
0
72
0
33
16
50
1.46
12041--12067
7
3.9
7
100
0
54
55
14
0
29
1.40

Tables:   1

The End!