Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012283.1 Corchorus capsularis cultivar CVL-1 contig12304, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15660

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1716--1750
16
2.2
16
89
0
52
20
8
31
40
1.82
1732--2297
116
4.9
116
91
1
872
34
21
22
21
1.97
1732--2297
231
2.5
229
90
2
868
34
21
22
21
1.97
2381--2410
14
2.1
14
100
0
60
20
0
13
66
1.24
2433--2468
18
1.9
19
88
5
56
52
5
11
30
1.59
2666--2704
16
2.4
16
86
4
51
30
0
10
58
1.31
2674--2722
26
1.9
25
84
12
64
36
2
6
55
1.37
4655--4697
20
2.2
20
100
0
86
34
27
9
27
1.88
4756--4981
116
1.9
116
93
0
389
39
19
11
29
1.87
5819--5851
15
2.2
15
94
0
57
27
3
42
27
1.70
13095--13154
28
2.1
28
93
0
102
50
8
8
33
1.63
15294--15347
25
2.2
25
89
0
81
29
24
44
1
1.64
15396--15452
14
3.9
14
75
8
51
75
0
21
3
0.95
15401--15447
19
2.6
18
80
9
51
78
0
19
2
0.85

Tables:   1

The End!