Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012284.1 Corchorus capsularis cultivar CVL-1 contig12305, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11162

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
101--133
14
2.3
15
89
5
50
63
0
6
30
1.18
1655--1684
2
14.5
2
93
6
51
50
0
3
46
1.18
1694--1758
31
2.1
31
100
0
130
30
6
27
35
1.81
3173--3204
2
16.0
2
100
0
64
0
50
0
50
1.00
3810--3842
15
2.2
15
100
0
66
36
18
27
18
1.94
8943--8982
20
2.1
20
86
9
57
5
10
2
82
0.91

Tables:   1

The End!