Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012285.1 Corchorus capsularis cultivar CVL-1 contig12306, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19093

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--35
10
2.7
10
100
0
54
14
0
0
85
0.61
40--83
21
2.2
20
87
4
61
31
2
11
54
1.48
60--142
26
3.2
26
80
16
100
33
1
9
55
1.40
34--132
37
2.7
37
77
14
100
33
2
10
54
1.45
60--136
11
6.1
13
68
25
58
32
1
9
57
1.38
1778--1876
16
6.4
16
75
8
62
28
19
24
28
1.98

Tables:   1

The End!