Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012289.1 Corchorus capsularis cultivar CVL-1 contig12310, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20740

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1840--1925
27
3.1
27
74
12
93
20
11
25
41
1.86
1849--2003
26
5.6
25
70
25
91
20
12
28
38
1.89
1843--2004
58
2.9
56
90
3
245
19
12
27
40
1.88
6824--6853
8
3.9
8
91
8
53
20
0
26
53
1.46
6812--6860
15
3.2
15
91
2
71
20
4
26
48
1.67
14520--14674
32
5.5
26
69
26
95
21
12
29
37
1.90
14537--14649
32
3.7
32
70
23
100
21
13
27
38
1.90
14464--14675
58
3.8
58
89
7
305
21
12
27
38
1.90
15068--15097
6
5.0
6
100
0
60
50
16
0
33
1.46
16026--16055
10
3.0
10
90
0
51
26
10
13
50
1.73
17027--17059
9
3.7
9
91
0
57
39
51
0
9
1.34
18192--18341
45
3.3
45
83
0
192
27
8
19
44
1.79
18580--18613
2
17.0
2
100
0
68
50
0
0
50
1.00
18799--18852
19
2.8
18
83
8
63
40
12
5
40
1.67

Tables:   1

The End!