Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012290.1 Corchorus capsularis cultivar CVL-1 contig12311, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37311

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3937--3970
10
3.4
10
95
0
59
0
11
0
88
0.52
5681--5711
14
2.2
14
94
0
53
90
0
9
0
0.46
8201--8271
22
3.2
21
75
20
65
61
11
0
26
1.29
10670--10825
58
2.6
59
82
5
181
32
17
12
36
1.88
10876--10906
2
16.0
2
93
6
55
48
0
0
51
1.00
13356--13389
2
17.5
2
90
6
52
47
0
0
52
1.00
13735--13763
2
15.0
2
92
7
51
48
0
0
51
1.00
35678--35793
58
2.0
58
86
3
162
31
9
22
37
1.86
36964--37000
17
2.2
17
90
9
58
0
16
0
83
0.64

Tables:   1

The End!