Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012293.1 Corchorus capsularis cultivar CVL-1 contig12314, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17613

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1711--1790
28
2.9
28
96
1
144
52
3
7
36
1.48
3159--3196
7
5.7
7
87
6
53
52
2
0
44
1.14
10828--10863
19
1.9
18
88
5
54
33
22
2
41
1.68
16265--16289
10
2.5
10
100
0
50
28
8
24
40
1.83
16409--16445
19
2.0
18
89
5
56
29
21
8
40
1.82
16850--16974
61
2.0
61
100
0
250
39
21
8
31
1.82

Tables:   1

The End!