Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012294.1 Corchorus capsularis cultivar CVL-1 contig12315, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12413

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
588--612
10
2.5
10
100
0
50
28
8
24
40
1.83
732--768
19
2.0
18
89
5
56
29
21
8
40
1.82
8524--8616
44
2.1
44
89
0
141
43
23
10
22
1.85
8550--8613
20
3.0
20
75
20
67
43
21
10
23
1.84
8568--8713
77
1.9
77
88
4
220
45
19
10
23
1.82
8568--8756
77
2.5
72
83
9
216
43
19
11
24
1.84
12239--12326
43
2.0
43
93
0
149
30
19
13
36
1.90
12330--12383
21
2.6
21
87
0
81
38
14
0
46
1.45

Tables:   1

The End!