Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012295.1 Corchorus capsularis cultivar CVL-1 contig12316, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10319

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--143
36
4.0
36
85
1
187
42
9
23
24
1.83
188--306
36
3.4
34
79
17
138
46
7
17
28
1.75
178--306
68
1.9
68
90
6
208
47
6
17
28
1.73
178--285
32
3.3
31
77
19
119
47
7
16
28
1.74
5573--5844
60
4.6
60
83
2
350
24
23
22
29
1.99
5583--5862
119
2.3
120
85
1
357
24
24
22
28
1.99
5838--5895
28
2.1
29
83
6
75
22
24
20
32
1.98
9814--9992
11
16.1
11
84
4
180
51
8
22
17
1.73
9987--10308
36
8.9
36
88
0
464
42
8
22
27
1.82
9986--10308
72
4.5
72
90
0
520
42
8
22
26
1.82

Tables:   1

The End!