Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012300.1 Corchorus capsularis cultivar CVL-1 contig12321, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3912

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
555--589
17
2.1
17
88
0
52
37
2
14
45
1.59
1834--1868
18
2.1
16
89
10
52
80
0
20
0
0.72
2659--3027
35
10.6
35
92
1
469
28
17
22
31
1.97
2907--3158
35
7.5
35
84
9
312
28
19
17
34
1.95
3054--3108
25
2.2
25
90
0
83
27
21
14
36
1.93
3019--3143
60
2.1
60
92
0
205
28
20
16
35
1.94
2984--3158
95
1.8
95
92
0
296
28
20
16
34
1.94
2983--3178
95
2.1
95
85
1
268
29
20
16
33
1.94

Tables:   1

The End!