Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012306.1 Corchorus capsularis cultivar CVL-1 contig12327, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19360

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
439--476
19
2.1
18
90
5
58
28
21
2
47
1.64
1163--1303
71
2.0
71
97
0
264
24
19
15
41
1.90
4234--4311
29
2.7
29
82
9
79
24
8
16
50
1.74
10772--10811
19
2.1
19
90
0
62
62
0
2
35
1.09
10899--10934
19
1.9
20
88
11
58
69
0
0
30
0.89
12335--12362
6
4.7
6
100
0
56
53
14
0
32
1.41
12359--12403
13
3.5
13
90
3
74
55
8
13
22
1.65
15564--15615
10
4.8
10
75
15
50
13
26
48
11
1.77
19047--19129
35
2.3
36
80
11
91
59
3
9
27
1.46
19063--19136
36
2.1
36
85
10
98
58
2
9
29
1.44

Tables:   1

The End!