Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012308.1 Corchorus capsularis cultivar CVL-1 contig12329, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14299

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8496--8546
4
12.8
4
95
0
93
25
1
0
72
0.95
13035--13295
63
4.2
63
78
11
168
21
18
19
40
1.92
13082--13304
120
1.9
120
85
1
313
20
17
21
40
1.91
13082--13359
63
4.5
63
79
7
241
19
18
21
40
1.92
13082--13371
120
2.4
118
78
11
268
20
18
21
39
1.92
13653--13725
27
2.6
29
85
8
98
20
15
21
42
1.89
13653--13725
28
2.7
26
87
6
92
20
15
21
42
1.89
13833--13880
24
2.0
24
100
0
96
25
16
12
45
1.82
14024--14063
16
2.5
17
80
15
50
75
5
17
2
1.10

Tables:   1

The End!