Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012323.1 Corchorus capsularis cultivar CVL-1 contig12344, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1992

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1385--1751
35
10.7
35
81
10
375
38
9
17
34
1.82
1454--1652
63
3.0
63
81
11
247
37
9
16
36
1.81
1491--1547
28
2.0
28
93
0
96
40
10
14
35
1.80
1385--1751
133
2.7
134
79
8
368
38
9
17
34
1.82
1382--1686
168
1.8
170
91
1
515
37
9
18
34
1.83

Tables:   1

The End!