Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012330.1 Corchorus capsularis cultivar CVL-1 contig12351, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15976

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
224--261
18
2.1
19
85
5
51
55
0
7
36
1.29
1499--1546
22
2.2
22
92
3
80
2
25
41
31
1.67
1566--1717
15
9.5
15
68
19
76
54
1
2
41
1.22
1622--1720
13
7.5
13
72
18
64
53
1
2
43
1.19
1584--1729
51
3.0
47
77
15
152
52
1
2
44
1.21
9440--9472
15
2.2
15
94
0
57
27
42
6
24
1.78
9837--10038
100
2.0
100
90
1
316
33
13
17
35
1.89
10030--10228
101
2.0
101
85
1
274
32
21
13
32
1.92
15288--15348
24
2.5
24
94
0
104
18
21
24
36
1.95
15288--15355
24
3.0
23
89
6
86
16
20
25
38
1.92

Tables:   1

The End!