Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012331.1 Corchorus capsularis cultivar CVL-1 contig12352, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17610

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
684--708
2
12.5
2
100
0
50
52
48
0
0
1.00
5055--5080
2
13.0
2
100
0
52
50
0
0
50
1.00
5803--5852
5
10.2
5
79
12
59
84
0
16
0
0.63
5802--5850
21
2.5
19
84
12
64
85
0
14
0
0.59
5805--5848
21
2.1
21
95
0
79
84
0
15
0
0.63
5803--5857
26
2.0
28
86
6
78
81
0
18
0
0.68
5808--5850
10
4.2
10
91
5
68
86
0
13
0
0.58
6184--6266
28
3.0
28
78
8
80
43
26
13
16
1.85
6234--6324
46
2.0
46
82
2
110
42
25
13
18
1.86
13206--13241
3
12.0
3
100
0
72
66
0
0
33
0.92

Tables:   1

The End!