Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012334.1 Corchorus capsularis cultivar CVL-1 contig12355, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11387

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1296--1717
35
12.1
35
81
5
440
33
17
17
30
1.94
1296--1696
175
2.3
175
89
0
588
33
17
17
30
1.94
1680--1825
54
2.7
52
80
7
175
32
22
18
26
1.97
1788--1860
35
2.1
35
86
0
101
34
17
17
30
1.94
1737--1948
89
2.4
89
89
2
320
33
21
16
28
1.95
1877--1983
35
3.1
34
89
4
144
33
15
15
34
1.90
2918--2955
11
3.4
11
83
16
51
0
13
5
81
0.85
2918--2957
12
3.4
12
82
3
55
0
12
7
80
0.91
2922--2955
11
2.8
12
91
8
52
0
14
5
79
0.91
10170--10217
21
2.3
21
88
0
69
8
37
14
39
1.76

Tables:   1

The End!