Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012336.1 Corchorus capsularis cultivar CVL-1 contig12357, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13714

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1384--1442
30
2.0
30
83
6
75
37
5
16
40
1.71
1386--1764
192
2.0
191
92
1
634
39
7
10
43
1.66
2044--2081
20
2.0
20
89
5
60
34
0
2
63
1.09
3105--3437
141
2.4
141
88
1
508
42
10
10
36
1.74
10284--10323
13
3.1
13
85
0
53
45
15
15
25
1.84
10316--10346
11
2.8
11
90
0
53
32
9
22
35
1.87
10717--10885
41
4.1
41
82
3
180
34
15
14
34
1.89

Tables:   1

The End!