Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012338.1 Corchorus capsularis cultivar CVL-1 contig12359, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31725

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
938--1009
29
2.5
29
100
0
144
29
20
5
44
1.74
7449--7664
106
2.0
106
100
0
432
32
17
9
40
1.81
14128--14162
14
2.6
14
90
4
54
2
14
0
82
0.77
15414--15473
31
1.9
31
89
0
93
30
20
8
41
1.81
15707--16018
159
2.0
158
94
1
547
26
15
5
51
1.65
18502--18651
54
2.8
55
71
19
134
40
7
2
50
1.42
23199--23238
20
2.0
20
95
0
71
35
32
5
27
1.79
24785--24829
22
2.0
22
95
0
81
28
22
24
24
1.99
24954--25014
18
3.3
18
77
6
61
39
3
11
45
1.57

Tables:   1

The End!