Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012339.1 Corchorus capsularis cultivar CVL-1 contig12360, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41069

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
687--2286
797
2.0
797
93
1
2733
41
16
14
28
1.87
5807--6191
38
10.3
37
84
5
440
44
7
21
25
1.79
5788--6191
112
3.6
112
85
5
505
44
7
21
26
1.79
5794--6262
150
3.2
149
85
6
571
44
8
20
26
1.80
5807--6263
74
6.2
74
84
6
484
45
8
19
25
1.79
6105--6297
37
5.4
34
80
13
176
48
11
14
25
1.78
5995--6263
108
2.5
108
79
9
262
47
9
17
25
1.77
6303--6508
39
5.3
39
94
0
358
45
7
24
23
1.78
7860--7932
28
2.5
30
80
15
89
21
15
12
50
1.76
9258--9296
2
20.0
2
89
5
62
53
0
0
46
1.00
10078--11092
35
28.9
35
89
3
1542
33
21
14
29
1.93
11203--11250
22
2.2
22
85
7
62
12
33
6
47
1.66
12494--12542
20
2.4
21
86
10
66
10
22
0
67
1.20
17570--17793
87
2.6
88
91
2
353
35
16
4
44
1.68
18231--18263
2
17.0
2
87
6
50
54
0
0
45
0.99
38338--38500
82
2.0
82
92
0
272
25
16
31
26
1.97

Tables:   1

The End!