Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012342.1 Corchorus capsularis cultivar CVL-1 contig12363, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25414

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--31
2
15.5
2
100
0
62
0
51
0
48
1.00
1101--1158
29
2.0
29
100
0
116
34
37
6
20
1.80
19677--19747
29
2.4
30
80
2
81
43
15
19
21
1.87
21494--21591
25
4.1
25
77
20
104
38
0
27
33
1.57
21547--21577
15
2.1
15
93
0
53
35
0
29
35
1.58
24776--24944
31
5.6
30
70
13
141
34
19
18
27
1.96
24779--24942
60
2.7
60
92
0
256
34
19
18
26
1.95
24974--25169
31
6.5
30
73
13
152
26
18
18
36
1.94
25002--25165
60
2.7
59
88
3
240
26
18
18
36
1.94

Tables:   1

The End!