Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012344.1 Corchorus capsularis cultivar CVL-1 contig12365, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17675

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
180--661
120
4.1
120
88
3
724
31
16
26
25
1.96
450--513
33
1.9
33
90
6
103
31
20
26
21
1.98
278--596
57
5.5
57
66
21
153
31
16
27
24
1.96
180--661
234
2.0
236
89
2
725
31
16
26
25
1.96
564--632
33
2.1
33
83
5
86
31
18
24
24
1.98
1941--1965
2
12.5
2
100
0
50
52
0
0
48
1.00
11141--11165
13
1.9
13
100
0
50
48
8
28
16
1.74
13454--13485
2
15.5
2
93
6
55
50
0
3
46
1.17
14264--14438
86
2.0
86
100
0
350
36
13
11
38
1.81
14397--14449
25
2.1
26
92
3
90
39
11
13
35
1.80

Tables:   1

The End!