Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012348.1 Corchorus capsularis cultivar CVL-1 contig12369, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17632

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5288--5355
21
3.2
21
69
10
66
33
14
8
42
1.77
5261--5362
42
2.4
42
96
1
186
31
12
10
45
1.77
5724--5778
26
2.1
26
96
0
101
38
18
14
29
1.90
6624--6662
21
1.9
20
94
5
69
35
25
12
25
1.92
11548--11605
12
4.6
12
74
19
55
3
22
0
74
0.97
11540--11606
20
3.5
19
86
8
91
2
23
0
73
0.97
17461--17528
29
2.3
29
79
2
73
39
23
13
23
1.90

Tables:   1

The End!