Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012351.1 Corchorus capsularis cultivar CVL-1 contig12372, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20445

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1016--1074
19
2.9
21
73
21
61
35
18
3
42
1.67
1044--1074
11
2.8
11
90
0
53
41
19
0
38
1.51
12258--12336
35
2.3
35
86
2
115
27
16
22
32
1.96
13011--13044
14
2.4
14
95
0
59
23
11
14
50
1.76
13185--13223
20
2.0
20
89
0
60
28
10
20
41
1.85
15705--15736
14
2.3
14
94
0
55
46
9
12
31
1.73
16361--16630
37
7.2
37
88
6
296
50
6
15
26
1.69
16500--16563
21
3.2
21
64
28
57
56
4
14
25
1.57
16361--16675
153
2.1
149
81
8
363
51
6
15
25
1.68
16361--16763
75
5.3
72
77
10
229
51
6
16
25
1.69
16396--16820
153
2.8
148
80
10
407
50
7
16
25
1.70
16922--16962
19
2.2
19
86
4
57
46
0
29
24
1.53
16923--17077
44
3.5
44
78
8
170
53
1
22
22
1.53
16941--17099
25
6.6
25
71
23
110
55
1
21
22
1.51
16962--17000
18
2.2
18
90
9
62
58
2
23
15
1.49

Tables:   1

The End!