Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012364.1 Corchorus capsularis cultivar CVL-1 contig12385, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19655

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
882--1081
51
4.0
51
86
5
286
26
19
16
38
1.92
7938--8003
27
2.3
31
75
15
70
51
21
12
15
1.75
10601--10797
51
4.0
51
83
11
241
23
20
19
36
1.95
10663--10748
42
2.0
42
100
0
172
23
22
18
36
1.95
10615--10797
93
2.0
93
91
0
294
24
20
20
34
1.96
12811--12850
3
13.3
3
100
0
80
0
0
32
67
0.91
14525--14679
51
3.0
51
95
0
265
24
19
16
39
1.92
18936--19036
38
3.0
32
81
10
103
27
23
12
35
1.92
19272--19307
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!