Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012365.1 Corchorus capsularis cultivar CVL-1 contig12386, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23616

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1539--1564
2
13.0
2
100
0
52
50
0
0
50
1.00
9174--9257
41
2.0
42
95
2
152
42
4
5
46
1.49
9178--9265
42
2.1
41
89
2
131
44
4
6
44
1.51
15400--15424
1
25.0
1
100
0
50
100
0
0
0
0.00
23587--23616
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!