Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012367.1 Corchorus capsularis cultivar CVL-1 contig12388, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30509

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12838--13065
112
2.0
114
98
1
442
34
16
11
37
1.86
13180--13245
30
2.2
31
89
8
100
33
9
15
42
1.78
16840--16886
13
3.7
13
81
16
62
82
2
14
0
0.75
16847--16888
21
2.0
21
90
4
66
83
4
11
0
0.79
23929--23979
2
26.0
2
96
4
95
0
49
0
50
1.00
23973--24113
52
2.7
52
96
0
255
3
36
27
32
1.74
24075--24203
45
2.9
45
89
0
204
3
36
21
37
1.72
24115--24194
20
3.8
20
69
15
61
3
33
21
41
1.71
26152--30004
320
11.9
319
81
5
3925
34
13
16
35
1.88
26152--30004
642
6.0
643
85
4
4265
34
13
16
35
1.88
29927--30060
72
1.9
72
85
3
189
36
14
15
32
1.89

Tables:   1

The End!