Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012371.1 Corchorus capsularis cultivar CVL-1 contig12392, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46905

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11076--11112
19
1.9
19
88
0
56
32
16
13
37
1.87
18514--18543
7
4.3
7
100
0
60
13
13
26
46
1.80
19236--19279
23
1.9
23
100
0
88
36
9
15
38
1.80
20973--21009
18
2.1
18
94
0
65
32
18
21
27
1.97
27424--27580
73
2.2
72
87
4
219
43
21
14
21
1.87
32670--32703
2
17.0
2
100
0
68
50
0
0
50
1.00
34749--34802
27
1.9
28
85
7
74
31
11
5
51
1.60
46304--46337
14
2.4
14
90
0
50
29
0
5
64
1.17
46595--46637
21
2.0
22
86
4
61
18
37
9
34
1.83

Tables:   1

The End!