Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012373.1 Corchorus capsularis cultivar CVL-1 contig12394, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5631

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
821--1263
234
1.9
231
85
4
620
34
15
14
35
1.88
1541--1566
2
13.0
2
100
0
52
50
0
0
50
1.00
1685--3038
698
1.9
702
86
2
1927
34
16
14
33
1.90
1051--4007
332
8.7
329
76
9
2425
34
17
15
33
1.90
2387--4004
666
2.4
660
85
4
2144
34
17
14
33
1.91
4196--4255
30
2.1
29
81
6
68
38
8
16
36
1.79

Tables:   1

The End!