Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012380.1 Corchorus capsularis cultivar CVL-1 contig12401, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43246

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6279--6551
134
2.0
134
99
0
537
42
11
26
20
1.86
6326--6605
134
2.2
128
85
8
367
42
11
28
17
1.85
7131--7575
217
2.0
217
90
7
691
38
17
14
29
1.89
19657--19685
2
14.5
2
100
0
58
48
0
0
51
1.00
29983--30070
30
2.9
31
82
1
115
36
23
22
17
1.94
33781--33813
16
2.1
16
100
0
66
21
12
24
42
1.86
36954--36988
16
2.2
16
90
10
54
20
14
40
25
1.90
40787--40831
20
2.2
20
84
4
54
26
35
8
28
1.87

Tables:   1

The End!