Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012382.1 Corchorus capsularis cultivar CVL-1 contig12403, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25414

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72--139
26
2.6
26
84
9
93
35
1
8
54
1.41
96--139
15
3.2
15
72
24
51
36
0
9
54
1.32
149--206
25
2.4
25
91
5
93
41
0
24
34
1.55
2777--2829
24
2.2
25
89
3
81
56
1
3
37
1.28
18963--19202
113
2.1
114
92
0
401
44
17
13
24
1.85
23025--23056
1
32.0
1
100
0
64
100
0
0
0
0.00

Tables:   1

The End!