Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012390.1 Corchorus capsularis cultivar CVL-1 contig12411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34489

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6767--6823
26
2.1
27
81
12
73
22
10
12
54
1.68
6773--6827
26
2.1
26
90
6
85
18
10
10
60
1.59
11744--11816
16
4.6
16
84
0
92
2
13
34
49
1.57
11744--11815
32
2.2
32
100
0
144
2
12
34
50
1.55
11757--11821
16
4.1
16
85
0
94
3
12
33
50
1.55
11744--11833
32
2.8
32
88
3
83
4
14
36
44
1.65
14995--15024
11
2.7
11
94
0
51
63
0
6
30
1.20
25600--25624
13
1.9
13
100
0
50
44
0
0
56
0.99
25820--25863
3
14.7
3
100
0
88
31
0
0
68
0.90
28568--28619
22
2.3
21
78
12
59
53
13
11
21
1.70
29255--29419
90
1.9
88
81
7
199
29
20
6
43
1.77
31477--31513
2
18.5
2
100
0
74
48
0
0
51
1.00

Tables:   1

The End!