Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012402.1 Corchorus capsularis cultivar CVL-1 contig12423, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40235

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9637--9667
5
6.4
5
92
7
55
80
0
19
0
0.71
15464--15494
2
15.5
2
100
0
62
51
0
0
48
1.00
26224--26318
30
3.2
30
61
21
72
44
9
12
33
1.75
26217--26334
60
2.0
60
98
0
227
43
10
13
33
1.78
29946--29972
13
2.1
13
100
0
54
18
14
22
44
1.86
31165--31208
22
1.9
24
86
9
65
59
2
9
29
1.41

Tables:   1

The End!