Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012403.1 Corchorus capsularis cultivar CVL-1 contig12424, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3986

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1246--1317
31
2.3
31
85
0
99
22
25
13
38
1.91
1261--1319
31
1.9
31
96
0
109
20
18
16
44
1.87
2015--2096
29
2.7
29
86
5
101
37
12
23
26
1.90
2889--3184
109
2.7
110
89
4
443
49
1
11
37
1.50
3814--3879
7
9.4
7
84
11
64
77
1
12
9
1.06
3813--3868
29
1.9
29
88
0
85
76
1
14
7
1.07
3813--3875
29
2.2
29
82
0
81
77
1
12
7
1.05

Tables:   1

The End!