Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012404.1 Corchorus capsularis cultivar CVL-1 contig12425, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10022

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1229--1272
21
2.0
22
83
12
56
15
38
9
36
1.80
2084--2390
132
2.3
135
90
5
480
34
5
37
22
1.78
4086--4115
16
1.9
15
93
6
51
26
0
0
73
0.84
4185--4281
29
3.2
29
77
10
106
32
21
11
34
1.89
9970--10016
23
2.0
24
95
4
87
17
17
34
31
1.92

Tables:   1

The End!