Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012405.1 Corchorus capsularis cultivar CVL-1 contig12426, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23513

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6182--6216
18
1.9
18
88
0
52
77
2
0
20
0.90
8941--8965
13
1.9
13
100
0
50
44
16
24
16
1.86
9070--9142
37
2.0
37
86
0
101
41
21
8
28
1.82
17357--17554
31
6.5
31
77
5
190
17
22
25
34
1.96
17406--17545
57
2.4
58
86
6
192
16
20
25
38
1.92
18136--18201
34
2.1
31
86
11
89
59
6
7
27
1.49
23479--23513
2
17.5
2
100
0
70
51
0
0
48
1.00

Tables:   1

The End!