Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012407.1 Corchorus capsularis cultivar CVL-1 contig12428, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20664

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1124--1148
6
4.2
6
100
0
50
0
16
0
84
0.63
2587--2627
21
2.0
21
90
0
64
39
12
39
9
1.76
2670--2697
2
14.0
2
100
0
56
50
0
0
50
1.00
11622--11656
11
3.2
11
83
0
52
77
17
5
0
0.96
17957--17995
11
3.5
11
85
3
51
0
17
0
82
0.68

Tables:   1

The End!