Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012409.1 Corchorus capsularis cultivar CVL-1 contig12430, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12893

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
869--914
22
2.1
22
84
11
60
78
0
6
15
0.95
2463--2504
13
3.2
13
86
6
57
78
0
0
21
0.75
2474--2503
7
4.3
7
100
0
60
86
0
0
13
0.57
4846--4872
4
6.8
4
100
0
54
25
0
0
74
0.83
11387--12892
334
4.5
332
91
2
2439
35
15
15
33
1.89
11387--12892
667
2.3
666
93
2
2524
35
15
15
33
1.89

Tables:   1

The End!