Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012412.1 Corchorus capsularis cultivar CVL-1 contig12433, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17747

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
519--605
29
2.9
30
87
3
122
32
10
20
36
1.87
3679--3727
2
25.0
2
83
4
64
44
2
0
53
1.12
3733--3765
14
2.4
14
94
0
57
0
60
0
39
0.97
4693--4745
26
2.0
26
100
0
106
30
15
11
43
1.81
6513--6549
12
3.1
12
92
0
56
35
13
0
51
1.41
6516--6549
6
5.7
6
89
0
50
35
14
0
50
1.44
7432--7461
4
7.5
4
100
0
60
76
0
23
0
0.78
16445--16483
2
19.5
2
100
0
78
51
0
0
48
1.00
16595--16831
22
10.7
22
67
17
80
38
13
10
36
1.80
16821--16878
23
2.5
23
85
0
80
37
13
6
41
1.72
16775--17376
22
27.9
21
65
19
176
34
15
9
40
1.79
17339--17440
22
4.6
22
75
11
84
41
19
4
34
1.73
17335--17442
44
2.4
43
75
6
108
39
19
5
35
1.75

Tables:   1

The End!