Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012417.1 Corchorus capsularis cultivar CVL-1 contig12438, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31170

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1040--1144
39
2.7
39
80
11
119
42
10
38
8
1.70
2075--2189
11
10.5
11
80
0
140
20
27
24
26
1.99
2067--2189
33
3.7
33
98
0
237
21
28
24
26
1.99
3152--3223
31
2.4
30
88
6
101
37
15
9
37
1.80
3147--3256
29
3.6
31
79
9
129
32
13
10
43
1.77
3317--3348
15
2.1
16
94
5
57
50
0
0
50
1.00
8972--9044
29
2.4
29
81
4
83
28
20
20
30
1.98
15691--15731
20
2.0
20
86
9
57
31
19
2
46
1.63
26451--26484
14
2.4
14
95
0
59
26
11
29
32
1.92
27306--27360
12
4.5
12
93
4
92
25
21
16
36
1.94
27306--27360
25
2.2
24
93
3
92
25
21
16
36
1.94

Tables:   1

The End!