Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012418.1 Corchorus capsularis cultivar CVL-1 contig12439, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44374

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5547--7163
503
3.2
498
90
2
2415
34
14
16
34
1.90
8384--9556
497
2.3
499
89
2
1793
32
15
17
34
1.91
9827--10236
184
2.3
178
85
4
545
33
15
17
33
1.91
10688--11636
474
2.0
470
88
3
1424
34
15
16
34
1.90
26234--26323
45
2.0
45
97
0
171
56
13
11
18
1.66
30417--30539
60
2.0
60
98
0
237
10
26
8
53
1.65
32696--32728
15
2.2
15
100
0
66
60
15
0
24
1.35
33216--33262
17
2.8
17
84
12
69
38
14
23
23
1.92
41015--41039
2
12.5
2
100
0
50
52
0
0
48
1.00
42725--42856
54
2.5
53
90
2
194
21
27
22
28
1.99

Tables:   1

The End!