Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012420.1 Corchorus capsularis cultivar CVL-1 contig12441, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35607

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3698--3730
17
1.9
17
93
0
57
51
15
15
18
1.77
4662--4859
72
2.8
72
94
0
344
22
44
13
19
1.85
6050--6088
20
1.9
20
84
5
51
58
5
2
33
1.33
6093--6247
73
2.1
74
87
2
222
43
9
26
21
1.82
8987--9061
33
2.3
33
80
0
87
18
44
17
20
1.88
16274--16306
13
2.7
12
95
4
57
81
3
15
0
0.80
16274--16306
6
5.3
6
92
7
57
81
3
15
0
0.80
16926--17040
60
1.9
60
94
0
203
33
18
19
29
1.95
32263--32308
23
2.0
23
100
0
92
21
8
17
52
1.71
33682--33750
33
2.1
33
94
0
120
37
18
17
26
1.93
33835--35512
463
3.6
463
96
0
3025
28
14
20
36
1.92
35482--35540
28
2.1
28
96
0
109
22
15
27
35
1.94

Tables:   1

The End!