Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012421.1 Corchorus capsularis cultivar CVL-1 contig12442, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18564

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2014
464
4.4
463
94
0
3462
28
13
19
38
1.89
1--2014
927
2.2
927
94
0
3541
28
13
19
38
1.89
4519--4624
53
2.0
53
94
3
189
17
30
16
35
1.92
4591--4647
26
2.2
26
83
0
78
21
33
10
35
1.87
4600--4651
26
2.0
26
96
0
95
19
36
7
36
1.80
4606--4746
75
1.9
75
95
0
255
17
28
11
43
1.83
18276--18320
21
2.1
21
91
0
72
17
35
11
35
1.86

Tables:   1

The End!