Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: AWWV01012423.1 Corchorus capsularis cultivar CVL-1 contig12444, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 109840
ACGTcount: A:0.33, C:0.17, G:0.17, T:0.33
Found at i:2955 original size:21 final size:21
Alignment explanation
Indices: 2906--2969 Score: 85
Period size: 21 Copynumber: 3.0 Consensus size: 21
2896 TCGATAAGAG
*
2906 TAAAATTTGTTACTGTAC-GTG
1 TAAAATTTGTTACTGTACAG-A
* *
2927 TTAGATTTGTTACTGTACAGA
1 TAAAATTTGTTACTGTACAGA
2948 TAAAATTTGTTACTGTACAGA
1 TAAAATTTGTTACTGTACAGA
2969 T
1 T
2970 TAGAATATTC
Statistics
Matches: 37, Mismatches: 5, Indels: 2
0.84 0.11 0.05
Matches are distributed among these distances:
21 36 0.97
22 1 0.03
ACGTcount: A:0.31, C:0.09, G:0.17, T:0.42
Consensus pattern (21 bp):
TAAAATTTGTTACTGTACAGA
Found at i:5426 original size:19 final size:20
Alignment explanation
Indices: 5390--5433 Score: 58
Period size: 19 Copynumber: 2.4 Consensus size: 20
5380 TTGGGTTTAG
*
5390 TCAG-TTTTTTGAGTTCAGT
1 TCAGTTTTTTTGAGATCAGT
5409 TCAGTTTTTTTGA-ATCAGT
1 TCAGTTTTTTTGAGATCAGT
5428 T-AGTTT
1 TCAGTTT
5434 GAGTGTGAGT
Statistics
Matches: 23, Mismatches: 1, Indels: 3
0.85 0.04 0.11
Matches are distributed among these distances:
18 5 0.22
19 10 0.43
20 8 0.35
ACGTcount: A:0.18, C:0.09, G:0.18, T:0.55
Consensus pattern (20 bp):
TCAGTTTTTTTGAGATCAGT
Found at i:16686 original size:16 final size:16
Alignment explanation
Indices: 16665--16696 Score: 64
Period size: 16 Copynumber: 2.0 Consensus size: 16
16655 ATTTGGTCTG
16665 GTGGTAAAAATTGGTC
1 GTGGTAAAAATTGGTC
16681 GTGGTAAAAATTGGTC
1 GTGGTAAAAATTGGTC
16697 ATCGACCATT
Statistics
Matches: 16, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
16 16 1.00
ACGTcount: A:0.31, C:0.06, G:0.31, T:0.31
Consensus pattern (16 bp):
GTGGTAAAAATTGGTC
Found at i:36360 original size:38 final size:38
Alignment explanation
Indices: 36309--36384 Score: 152
Period size: 38 Copynumber: 2.0 Consensus size: 38
36299 GTCGTCAATT
36309 TGGGCTTTGGAAGAAACCATGAAATTGAAAGATGCATA
1 TGGGCTTTGGAAGAAACCATGAAATTGAAAGATGCATA
36347 TGGGCTTTGGAAGAAACCATGAAATTGAAAGATGCATA
1 TGGGCTTTGGAAGAAACCATGAAATTGAAAGATGCATA
36385 CGTCCAAACA
Statistics
Matches: 38, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
38 38 1.00
ACGTcount: A:0.39, C:0.11, G:0.26, T:0.24
Consensus pattern (38 bp):
TGGGCTTTGGAAGAAACCATGAAATTGAAAGATGCATA
Found at i:37499 original size:17 final size:17
Alignment explanation
Indices: 37477--37509 Score: 57
Period size: 17 Copynumber: 1.9 Consensus size: 17
37467 CACGCATCCT
37477 GAGGGCACAAAATTAAA
1 GAGGGCACAAAATTAAA
*
37494 GAGGGCACAAGATTAA
1 GAGGGCACAAAATTAA
37510 GAGCTAATCA
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
17 15 1.00
ACGTcount: A:0.48, C:0.12, G:0.27, T:0.12
Consensus pattern (17 bp):
GAGGGCACAAAATTAAA
Found at i:47130 original size:21 final size:21
Alignment explanation
Indices: 47104--47145 Score: 66
Period size: 21 Copynumber: 2.0 Consensus size: 21
47094 TCTTAGGTTC
*
47104 AACTCTCACGGAATGTGAGTT
1 AACTCTCACGGAATATGAGTT
*
47125 AACTCTCATGGAATATGAGTT
1 AACTCTCACGGAATATGAGTT
47146 TATTTGTAAT
Statistics
Matches: 19, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
21 19 1.00
ACGTcount: A:0.31, C:0.17, G:0.21, T:0.31
Consensus pattern (21 bp):
AACTCTCACGGAATATGAGTT
Found at i:53894 original size:33 final size:33
Alignment explanation
Indices: 53857--53919 Score: 90
Period size: 33 Copynumber: 1.9 Consensus size: 33
53847 TGATCTGGTT
** *
53857 TTTTAGTCGGTTTGCCTAACTTTTCCTTGATGC
1 TTTTAGTCGGTTTAACTAACTTTACCTTGATGC
*
53890 TTTTAGTCTGTTTAACTAACTTTACCTTGA
1 TTTTAGTCGGTTTAACTAACTTTACCTTGA
53920 CAGCTACTTA
Statistics
Matches: 26, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
33 26 1.00
ACGTcount: A:0.17, C:0.19, G:0.14, T:0.49
Consensus pattern (33 bp):
TTTTAGTCGGTTTAACTAACTTTACCTTGATGC
Found at i:56931 original size:124 final size:123
Alignment explanation
Indices: 56772--57001 Score: 334
Period size: 124 Copynumber: 1.9 Consensus size: 123
56762 ATTGCATAGA
* * * ** **
56772 TTTGCTTGTTGTGATTTTCCTTTTTCTGCTCTGATGGTTTCTTGATAGTGTTTCTTCTTGTCTGC
1 TTTGCTTGCTGTGAGTTTCCTTTTTCTGCTCTGATGGTTTCTGGATAACGTTTCTTCTCCTCTGC
**
56837 AGTTGTTCTCCCCATTGGAGCCGAGTTTATCCCTGTGGCAGCTAGGATTGCCGTCAAAT
66 AGTTG-TCTCCCCATTGGAGCCGAGCATATCCCTGTGGCAGCTAGGATTGCCGTCAAAT
* *
56896 TTTGCTTGCTGTGAGTTTCCTTTTTCTGTTTTGATGGTTTCTGGATAACGTTTCTTCTCCTCTGC
1 TTTGCTTGCTGTGAGTTTCCTTTTTCTGCTCTGATGGTTTCTGGATAACGTTTCTTCTCCTCTGC
* *
56961 AGTTGTCTCCCCATTGGAGCTGAGCATATCCTTGTGGCAGC
66 AGTTGTCTCCCCATTGGAGCCGAGCATATCCCTGTGGCAGC
57002 AAGGTGGCCT
Statistics
Matches: 93, Mismatches: 13, Indels: 1
0.87 0.12 0.01
Matches are distributed among these distances:
123 32 0.34
124 61 0.66
ACGTcount: A:0.12, C:0.22, G:0.23, T:0.44
Consensus pattern (123 bp):
TTTGCTTGCTGTGAGTTTCCTTTTTCTGCTCTGATGGTTTCTGGATAACGTTTCTTCTCCTCTGC
AGTTGTCTCCCCATTGGAGCCGAGCATATCCCTGTGGCAGCTAGGATTGCCGTCAAAT
Found at i:57121 original size:20 final size:20
Alignment explanation
Indices: 57076--57367 Score: 232
Period size: 20 Copynumber: 14.5 Consensus size: 20
57066 CATTGAGGGC
*
57076 CAATGTGAATTAAGGCAAGTT
1 CAATGTGAATT-AGGAAAGTT
*
57097 CAATGTGAATTGGGAAAGTT
1 CAATGTGAATTAGGAAAGTT
* * *
57117 GAATGTGAATAAGGCAAGTT
1 CAATGTGAATTAGGAAAGTT
57137 CAATGTGAATT-GGAAAGTT
1 CAATGTGAATTAGGAAAGTT
* *
57156 GAATGTGAATTAAGGCAAGTT
1 CAATGTGAATT-AGGAAAGTT
* * * *
57177 CAATGTCATTTGGGAAATTT
1 CAATGTGAATTAGGAAAGTT
* * *
57197 GAATGCGAATAAGGAAAGTT
1 CAATGTGAATTAGGAAAGTT
* *
57217 CAATGTGAATTGGGAATGTT
1 CAATGTGAATTAGGAAAGTT
* * *
57237 GAATGTGAATAAGGCAAGTT
1 CAATGTGAATTAGGAAAGTT
*
57257 CAATGTCAATT-GGTAAAGTT
1 CAATGTGAATTAGG-AAAGTT
* * *
57277 GAATGTGAATCAAGGCAAGTT
1 CAATGTGAAT-TAGGAAAGTT
* *
57298 CAATGTCAATT-GGAAAATTT
1 CAATGTGAATTAGG-AAAGTT
* * *
57318 GAATGTGAATAAGGCAAGTT
1 CAATGTGAATTAGGAAAGTT
* *
57338 CAATGTCAATTGGGAAAGTT
1 CAATGTGAATTAGGAAAGTT
57358 -AGATGTGAAT
1 CA-ATGTGAAT
57368 GTGCCGTGTA
Statistics
Matches: 205, Mismatches: 58, Indels: 17
0.73 0.21 0.06
Matches are distributed among these distances:
19 22 0.11
20 140 0.68
21 41 0.20
22 2 0.01
ACGTcount: A:0.37, C:0.07, G:0.26, T:0.29
Consensus pattern (20 bp):
CAATGTGAATTAGGAAAGTT
Found at i:57134 original size:40 final size:40
Alignment explanation
Indices: 57077--57367 Score: 433
Period size: 40 Copynumber: 7.2 Consensus size: 40
57067 ATTGAGGGCC
*
57077 AATGTGAATTAAGGCAAGTTCAATGTGAATTGGGAAAGTTG
1 AATGTGAA-TAAGGCAAGTTCAATGTCAATTGGGAAAGTTG
*
57118 AATGTGAATAAGGCAAGTTCAATGTGAATT-GGAAAGTTG
1 AATGTGAATAAGGCAAGTTCAATGTCAATTGGGAAAGTTG
* *
57157 AATGTGAATTAAGGCAAGTTCAATGTCATTTGGGAAATTTG
1 AATGTGAA-TAAGGCAAGTTCAATGTCAATTGGGAAAGTTG
* * * *
57198 AATGCGAATAAGGAAAGTTCAATGTGAATTGGGAATGTTG
1 AATGTGAATAAGGCAAGTTCAATGTCAATTGGGAAAGTTG
*
57238 AATGTGAATAAGGCAAGTTCAATGTCAATTGGTAAAGTTG
1 AATGTGAATAAGGCAAGTTCAATGTCAATTGGGAAAGTTG
* *
57278 AATGTGAATCAAGGCAAGTTCAATGTCAATTGGAAAATTTG
1 AATGTGAAT-AAGGCAAGTTCAATGTCAATTGGGAAAGTTG
57319 AATGTGAATAAGGCAAGTTCAATGTCAATTGGGAAAGTT-
1 AATGTGAATAAGGCAAGTTCAATGTCAATTGGGAAAGTTG
57358 AGATGTGAAT
1 A-ATGTGAAT
57368 GTGCCGTGTA
Statistics
Matches: 228, Mismatches: 18, Indels: 9
0.89 0.07 0.04
Matches are distributed among these distances:
39 18 0.08
40 149 0.65
41 61 0.27
ACGTcount: A:0.37, C:0.07, G:0.26, T:0.30
Consensus pattern (40 bp):
AATGTGAATAAGGCAAGTTCAATGTCAATTGGGAAAGTTG
Found at i:59158 original size:142 final size:140
Alignment explanation
Indices: 58902--59324 Score: 648
Period size: 142 Copynumber: 3.0 Consensus size: 140
58892 CTAACGTGAT
* *
58902 TTAACAGTGAGGCCTAATGTAAAAATGATTAATTTTAAGACATTTCAGAACAAAGCAGGCCCATT
1 TTAACAGTGAGGCCCAATGTAAAAATGATTAATTTTAAGACATTTTAGAACAAAGCAGGCCCATT
* *
58967 CCGAATTTTGGCCTAAATTGTACCGAATATAAAATTTAACCACCAATTTTTGTCCCATTTTAGGC
66 CTGAATTTTGGCCTAAATTGTACC-AAT-TAAAATTTAACCACCAATTTTTGGCCCATTTTAGGC
*
59032 CCAAAGTAAGAA
129 CCAATGTAAGAA
*
59044 TTAACAGTGAGGCCCAATATAAAAATGATTAATTTTAAGACATTTTAGAACAAAGCAGGCCCATT
1 TTAACAGTGAGGCCCAATGTAAAAATGATTAATTTTAAGACATTTTAGAACAAAGCAGGCCCATT
59109 CTGAATTTTGGCCTAAATTGTACCAATTAAAATATCTAACCACCAATTTTTGGCCCATTTTAGGC
66 CTGAATTTTGGCCTAAATTGTACCAATTAAAAT-T-TAACCACCAATTTTTGGCCCATTTTAGGC
*
59174 CCTATGTAAGAA
129 CCAATGTAAGAA
* * *
59186 TTAACAGTGAGGTCCAATGTAGAAATGATTAATTTTAAGACATTTTAGAACAAAGCAGACCCATT
1 TTAACAGTGAGGCCCAATGTAAAAATGATTAATTTTAAGACATTTTAGAACAAAGCAGGCCCATT
* * ** * *
59251 CTGAATTTTGGCCCAAATTGCACCAATCATAATTTTTAACCACCAAATTATGGCCCATTTTAGGC
66 CTGAATTTTGGCCTAAATTGTACCAAT--TAAAATTTAACCACCAATTTTTGGCCCATTTTAGGC
59316 CCAATGTAA
129 CCAATGTAA
59325 AAATGATTAA
Statistics
Matches: 259, Mismatches: 18, Indels: 8
0.91 0.06 0.03
Matches are distributed among these distances:
140 6 0.02
141 4 0.02
142 244 0.94
143 1 0.00
144 4 0.02
ACGTcount: A:0.37, C:0.19, G:0.14, T:0.30
Consensus pattern (140 bp):
TTAACAGTGAGGCCCAATGTAAAAATGATTAATTTTAAGACATTTTAGAACAAAGCAGGCCCATT
CTGAATTTTGGCCTAAATTGTACCAATTAAAATTTAACCACCAATTTTTGGCCCATTTTAGGCCC
AATGTAAGAA
Found at i:60822 original size:331 final size:330
Alignment explanation
Indices: 59725--61732 Score: 1932
Period size: 331 Copynumber: 6.1 Consensus size: 330
59715 GGTTTCTCGA
*
59725 GTCAATTTTTACAAAATTTTAGCTGAAATCGTGTACTAACAATCACGATTTTTGACTAAAAACG-
1 GTCAATTTTTACAAAATTTTAGCCGAAATCGTGTACTAAC-ATCACGATTTTTGACTAAAAACGC
* * * * * *
59789 GATTCCGAAGAGCCCTGGCTCAGTTTTACACGTTTTTTTGGCACCAAGTCTCATTGAAA-ATCTA
65 G-TTCCG--GAGCCCCGGCTCAGTTTTGCATG-ATTTTTGGCGCCAAGACTCATTGAAATATCTA
* * * *
59853 TATCCATCTAACCAAATCTTATCCACATTGGATTTAAGGATTTGTTTCTACGAGCATATAAATCA
126 TATCCATCTAACCAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATATCAATC-
* * * *
59918 TGTTTCGGTTCAATTAGGAATTAA-TCGGAAAAAATAGGAAAAACGAA-ATTAGAAGCTTGAATA
190 TGTTTCGATTCAATTAGAAATTAATTCGGAAAAAATAGAAAAAAC-AATATTAGAAGCGTGAATA
* * * * **
59981 GCCTTTCAATCTTTTTTGTGTTAAATTATATATTTTTTATGAGTATCTTGGCCAAAAATTGAGGA
254 GCCTTTCAATCTTTTTGGTGTTGAATTATATATTTTTTATGAATATCGTGGCTGAAAATTGAGGA
*
60046 -AAACTCTTTCGG
319 GAAA-TTTTTCGG
* * * * * *
60058 ATCAATTTTTATAAAAATTTAGCCAAAATCGTG---T---ATCACGATTTTTGGCTAAAAACACG
1 GTCAATTTTTACAAAATTTTAGCCGAAATCGTGTACTAACATCACGATTTTTGACTAAAAACGCG
* * * *
60117 TTCCGG-GTCCCTGGCTCGGTTTTGCATGATTTTTGGCGCCAAAACTCATTGAAATATCTATATT
66 TTCCGGAG-CCCCGGCTCAGTTTTGCATGATTTTTGGCGCCAAGACTCATTGAAATATCTATATC
* * * * * * *
60181 TATCTAACAAAATCTCAGCAACATTCGATTTAAGGATTTG--TTTACGGGCATCTCAATTCGGTT
130 CATCTAACCAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATATCAA-TCTGTT
* * *
60244 CCGATTTAATTAGAAATTAATTCTGAAAAAATAGAAAAAAACAATATTAGAAGCGTGAGA-AGCC
194 TCGATTCAATTAGAAATTAATTCGGAAAAAATAG-AAAAAACAATATTAGAAGCGTGA-ATAGCC
* * * * * * * *
60308 CTTCAATCTTTTCGATGTTGAATTATACAATTTTTTATGAATATGGTGG-TCGGAGATTAAGGAG
257 TTTCAATCTTTTTGGTGTTGAATTATA-TATTTTTTATGAATATCGTGGCT-GAAAATTGAGGAG
60372 AAATTTCTT-GG
320 AAATTT-TTCGG
* * *
60383 GTCAATTTTTGCAAAATTTTAGCTGAAATCGTGTACTAACCATCACGATTTTTCACTAAAAACGC
1 GTCAATTTTTACAAAATTTTAGCCGAAATCGTGTACTAA-CATCACGATTTTTGACTAAAAACGC
* * *** * * * *
60448 ATTCCGGATCCCTAACTCAGTTTTGGATGATTTTTGGCGCCAAGTCTCATTGAAATATCAACATC
65 GTTCCGGAGCCCCGGCTCAGTTTTGCATGATTTTTGGCGCCAAGACTCATTGAAATATCTATATC
* * ** * *
60513 CATCTAACCAAATCTTACCCACATTGGATTTAAACATTTGCTTTTACGAGCATATGAATCATGTT
130 CATCTAACCAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATATCAATC-TGTT
* * * ** * *
60578 TTGGTTCAATTAGGAATTAATTCGGAAAAAATAG-AAAAATGATATTGGAAGCGTGAATCGCCTT
194 TCGATTCAATTAGAAATTAATTCGGAAAAAATAGAAAAAACAATATTAGAAGCGTGAATAGCCTT
* *
60642 TCAATCTTTTTGGTGTTGAATTATATATTTTTTATTAGTATCGTGGCTGAAAATTGAGGA-AAAT
259 TCAATCTTTTTGGTGTTGAATTATATATTTTTTATGAATATCGTGGCTGAAAATTGAGGAGAAAT
60706 TCTTTCGG
324 T-TTTCGG
* * * * * *
60714 GTCAATTTTTACAAAATTGTAGCCGAAATCATGTACTAACTATGACGGTTTTTGGCTAAAATCGC
1 GTCAATTTTTACAAAATTTTAGCCGAAATCGTGTACTAAC-ATCACGATTTTTGACTAAAAACGC
* * *
60779 GTTCCGCG-GCCCCGACTCAGTTTTGCATGATTTATGTCGCCAAGACTCATTGAAATATCTATAT
65 GTTCCG-GAGCCCCGGCTCAGTTTTGCATGATTTTTGGCGCCAAGACTCATTGAAATATCTATAT
** * * * * * *
60843 TTATCTAACGAAATATCAGCCACATTGGATTTAAGGATTCGTTTTTAGGAGCATCTTAATCTGGT
129 CCATCTAACCAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATATCAATCT-GT
*
60908 TTCGATTTAATTAGAAATTAATTCGG-AAAAATAGAAAAAAAAAAACAATATTAGAAGCGT-AAG
193 TTCGATTCAATTAGAAATTAATTCGGAAAAAATAG-----AAAAAACAATATTAGAAGCGTGAA-
* ** * *
60971 AAGCCCTTT-AATCTTTTTGGCATTGAATTATATATTTTTAATGAATATGGTGACCGCCTGACCG
252 TAG-CCTTTCAATCTTTTTGGTGTTGAATTATATATTTTTTATGAATATCGTG---G-CTGA---
* * * **
61035 GAAATTGAGCAGAACTTTCTCAT
309 -AAATTGAGGAGAAATTTTTCGG
* ** * *
61058 GTCAATTTTTGCAAAATTTTAGATGAAAT--TGT-GT--CATCACTG-TTTTTGACTAAAAACGT
1 GTCAATTTTTACAAAATTTTAGCCGAAATCGTGTACTAACATCAC-GATTTTTGACTAAAAACGC
* * ** * * *
61117 GTTCCGGAGTCTCGGCTCA-TTTTGCACAATTTTTGGGGCCAAGTCTAATTGAAATATCTATATC
65 GTTCCGGAGCCCCGGCTCAGTTTTGCATGATTTTTGGCGCCAAGACTCATTGAAATATCTATATC
* * * * *
61181 CATTTAACCAAATCTTACCCATATTGGATTTAAGGATTTGTTTTTACGAGCATATGAATCATGTT
130 CATCTAACCAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATATCAATC-TGTT
* * * ** * *
61246 TCGATTCAATTAGGAATTAATACGGAAAAAATAGGAAAAATGATATTGGAAACGTGAATAGCCTT
194 TCGATTCAATTAGAAATTAATTCGGAAAAAATAGAAAAAACAATATTAGAAGCGTGAATAGCCTT
* * *
61311 TCAGTCTTTTTGGTGTTGAATTATATATTTTTTATTAATATCGTGGCCGAAAATTGAGGA-AAAT
259 TCAATCTTTTTGGTGTTGAATTATATATTTTTTATGAATATCGTGGCTGAAAATTGAGGAGAAAT
61375 TATTTCGG
324 T-TTTCGG
* * * * * *
61383 GTCAATTTTTAAAAAATTGTAGCCAAAATCGTGTACTAACTATCACGATTTTGGGCTAAAATCGC
1 GTCAATTTTTACAAAATTTTAGCCGAAATCGTGTACTAAC-ATCACGATTTTTGACTAAAAACGC
* * *
61448 GTTCCGGGGCCCCGTCTCAGTTTTGCATGATTTTTGGCGCC--GACTCATTGAAATATCTATATT
65 GTTCCGGAGCCCCGGCTCAGTTTTGCATGATTTTTGGCGCCAAGACTCATTGAAATATCTATATC
* * * * *
61511 TATCTAACGAAATCTCAGTCACATTGGATTTAAGGATTTGTTTTTATGAGCATATCAATTCGGTT
130 CATCTAACCAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATATCAA-TCTGTT
* * *
61576 TCGATTTAATTAGAAATTAACTCGG-AAAAATAGAAAAAAATAATATTAGAAGCGTGAGA-AGCC
194 TCGATTCAATTAGAAATTAATTCGGAAAAAATAG-AAAAAACAATATTAGAAGCGTGA-ATAGCC
* ** ** *
61639 CTTCAATAATTTT-GCATTGAATTATATA-TTTTTATGAATATGGTGGCT-AGAAATTGAGGAGA
257 TTTCAATCTTTTTGGTGTTGAATTATATATTTTTTATGAATATCGTGGCTGA-AAATTGAGGAGA
*
61701 AATTTCTCGG
321 AATTTTTCGG
* *
61711 ATCAATTTTTGCAAAATTTTAG
1 GTCAATTTTTACAAAATTTTAG
61733 ATGAAATTGT
Statistics
Matches: 1351, Mismatches: 257, Indels: 139
0.77 0.15 0.08
Matches are distributed among these distances:
322 31 0.02
323 39 0.03
324 108 0.08
325 92 0.07
326 31 0.02
327 5 0.00
328 52 0.04
329 29 0.02
330 145 0.11
331 244 0.18
332 177 0.13
333 85 0.06
334 46 0.03
335 2 0.00
336 55 0.04
337 117 0.09
338 41 0.03
339 3 0.00
340 4 0.00
341 1 0.00
342 3 0.00
344 37 0.03
345 4 0.00
ACGTcount: A:0.33, C:0.15, G:0.17, T:0.35
Consensus pattern (330 bp):
GTCAATTTTTACAAAATTTTAGCCGAAATCGTGTACTAACATCACGATTTTTGACTAAAAACGCG
TTCCGGAGCCCCGGCTCAGTTTTGCATGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCC
ATCTAACCAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATATCAATCTGTTTC
GATTCAATTAGAAATTAATTCGGAAAAAATAGAAAAAACAATATTAGAAGCGTGAATAGCCTTTC
AATCTTTTTGGTGTTGAATTATATATTTTTTATGAATATCGTGGCTGAAAATTGAGGAGAAATTT
TTCGG
Found at i:61446 original size:669 final size:655
Alignment explanation
Indices: 59717--61757 Score: 2625
Period size: 669 Copynumber: 3.1 Consensus size: 655
59707 TCTAGACCGG
* * * *
59717 TTTCTCGAGTCAATTTTTACAAAATTTTAGCTGAAATCGTGTACTAACAATCACGATTTTTGACT
1 TTTCTCG-GTCAATTTTTGCAAAATTTTAGATGAAAT--TGT-GT--C-ATCACGATTTTTCACT
* * ** * ** *
59782 AAAAACGGATTCCGAAGAGCCCTGGCTCAGTTTTACACGTTTTTTTGGCACCAAGTCTCATTGAA
59 AAAAACGCATTCCG--GATCCCTAACTCAGTTTTGCAC-AATTTTTGGCGCCAAGTCTCATTGAA
* *
59847 A-ATCTATATCCATCTAACCAAATCTTATCCACATTGGATTTAAGGATTTGTTTCTACGAGCATA
121 ATATCTATATCCATCTAACCAAATCTTACCCACATTGGATTTAAGGATTTGTTTTTACGAGCATA
* * * * *
59911 TAAATCATGTTTCGGTTCAATTAGGAATTAATCGGAAAAAATAGGAAAAACGAAATTAGAAGCTT
186 TGAATCATGTTTCGGTTCAATTAGGAATTAATCGGAAAAAATAGGAAAAATGATATTGGAAGCGT
* * * * *
59976 GAATAGCCTTTCAATCTTTTTTGTGTTAAATTATATATTTTTTATGAGTATCTTGGCCAAAAATT
251 GAATAGCCTTTCAATCTTTTTGGTGTTGAATTATATATTTTTTATTAGTATCGTGGCCGAAAATT
* *
60041 GAGGAAAACTCTTTCGGATCAATTTTTATAAAAATT-TAGCCAAAATCGTG-------TATCACG
316 GAGGAAAATTCTTTCGGGTCAATTTTTA-AAAAATTGTAGCCAAAATCGTGTACTAACTATCACG
* * * * * *
60098 ATTTTTGGCTAAAAACACGTTCCGGGTCCCTGGCTCGGTTTTGCATGATTTTTGGCGCCAAAACT
380 ATTTTTGGCTAAAATCGCGTTCCGGG-CCCCGACTCAGTTTTGCATGATTTTTGGCGCCAAGACT
* * * *
60163 CATTGAAATATCTATATTTATCTAACAAAATCTCAGCAACATTCGATTTAAGGATT-TGTTTACG
444 CATTGAAATATCTATATTTATCTAACGAAATCTCAGCCACATTGGATTTAAGGATTGTTTTTA-G
* *
60227 G-GCATCTCAATTCGGTTCCGATTTAATTAGAAATTAATTCTGAAAAAATAGAAAAAAACAATAT
508 GAGCATCTCAATTCGGTTTCGATTTAATTAGAAATTAATTC-GGAAAAATAGAAAAAAACAATAT
* *** *
60291 TAGAAGCGTGAGAAGCCCTTCAATCTTTTCGATGTTGAATTATACAATTTTTTATGAATATGGTG
572 TAGAAGCGTGAGAAGCCCTTCAATCTTTTTGGCATTGAATTATA-TA-TTTTTATGAATATGGTG
* *
60356 G-T-CGGAGATTAAGGAGAAA
635 GCTACGGAAATTGAGGAGAAA
* * *
60375 TTTCTTGGGTCAATTTTTGCAAAATTTTAGCTGAAATCGTGTACTAACCATCACGATTTTTCACT
1 TTTC-TCGGTCAATTTTTGCAAAATTTTAGATGAAAT--TGT-GT---CATCACGATTTTTCACT
* **
60440 AAAAACGCATTCCGGATCCCTAACTCAGTTTTGGATGATTTTTGGCGCCAAGTCTCATTGAAATA
59 AAAAACGCATTCCGGATCCCTAACTCAGTTTTGCACAATTTTTGGCGCCAAGTCTCATTGAAATA
* * ** *
60505 TCAACATCCATCTAACCAAATCTTACCCACATTGGATTTAAACATTTGCTTTTACGAGCATATGA
124 TCTATATCCATCTAACCAAATCTTACCCACATTGGATTTAAGGATTTGTTTTTACGAGCATATGA
*
60570 ATCATGTTTTGGTTCAATTAGGAATTAATTCGGAAAAAATA-GAAAAATGATATTGGAAGCGTGA
189 ATCATGTTTCGGTTCAATTAGGAATTAA-TCGGAAAAAATAGGAAAAATGATATTGGAAGCGTGA
* *
60634 ATCGCCTTTCAATCTTTTTGGTGTTGAATTATATATTTTTTATTAGTATCGTGGCTGAAAATTGA
253 ATAGCCTTTCAATCTTTTTGGTGTTGAATTATATATTTTTTATTAGTATCGTGGCCGAAAATTGA
* * * * *
60699 GGAAAATTCTTTCGGGTCAATTTTTACAAAATTGTAGCCGAAATCATGTACTAACTATGACGGTT
318 GGAAAATTCTTTCGGGTCAATTTTTAAAAAATTGTAGCCAAAATCGTGTACTAACTATCACGATT
* *
60764 TTTGGCTAAAATCGCGTTCCGCGGCCCCGACTCAGTTTTGCATGATTTATGTCGCCAAGACTCAT
383 TTTGGCTAAAATCGCGTTCCG-GGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCAAGACTCAT
*
60829 TGAAATATCTATATTTATCTAACGAAATATCAGCCACATTGGATTTAAGGATTCGTTTTTAGGAG
447 TGAAATATCTATATTTATCTAACGAAATCTCAGCCACATTGGATTTAAGGATT-GTTTTTAGGAG
*
60894 CATCTTAA-TCTGGTTTCGATTTAATTAGAAATTAATTCGGAAAAATAGAAAAAAAAAAACAATA
511 CATCTCAATTC-GGTTTCGATTTAATTAGAAATTAATTCGGAAAAATAG----AAAAAAACAATA
* *
60958 TTAGAAGCGTAAGAAGCCCTTTAATCTTTTTGGCATTGAATTATATATTTTTAATGAATATGGTG
571 TTAGAAGCGTGAGAAGCCCTTCAATCTTTTTGGCATTGAATTATATATTTTT-ATGAATATGGTG
* *
61023 ACCGCCTGACCGGAAATTGAGCAGAAC
635 ---G-CT-A-CGGAAATTGAGGAGAAA
* *
61050 TTTCTCATGTCAATTTTTGCAAAATTTTAGATGAAATTGTGTCATCACTG-TTTTTGACTAAAAA
1 TTTCTC-GGTCAATTTTTGCAAAATTTTAGATGAAATTGTGTCATCAC-GATTTTTCACTAAAAA
** * ** * *
61114 CGTGTTCCGGAGTCTC-GGCTCA-TTTTGCACAATTTTTGGGGCCAAGTCTAATTGAAATATCTA
64 CGCATTCCGGA-TCCCTAACTCAGTTTTGCACAATTTTTGGCGCCAAGTCTCATTGAAATATCTA
* *
61177 TATCCATTTAACCAAATCTTACCCATATTGGATTTAAGGATTTGTTTTTACGAGCATATGAATCA
128 TATCCATCTAACCAAATCTTACCCACATTGGATTTAAGGATTTGTTTTTACGAGCATATGAATCA
* *
61242 TGTTTCGATTCAATTAGGAATTAATACGGAAAAAATAGGAAAAATGATATTGGAAACGTGAATAG
193 TGTTTCGGTTCAATTAGGAATTAAT-CGGAAAAAATAGGAAAAATGATATTGGAAGCGTGAATAG
* *
61307 CCTTTCAGTCTTTTTGGTGTTGAATTATATATTTTTTATTAATATCGTGGCCGAAAATTGAGGAA
257 CCTTTCAATCTTTTTGGTGTTGAATTATATATTTTTTATTAGTATCGTGGCCGAAAATTGAGGAA
* *
61372 AATTATTTCGGGTCAATTTTTAAAAAATTGTAGCCAAAATCGTGTACTAACTATCACGATTTTGG
322 AATTCTTTCGGGTCAATTTTTAAAAAATTGTAGCCAAAATCGTGTACTAACTATCACGATTTTTG
*
61437 GCTAAAATCGCGTTCCGGGGCCCCGTCTCAGTTTTGCATGATTTTTGGCGCC--GACTCATTGAA
387 GCTAAAATCGCGTTCC-GGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCAAGACTCATTGAA
* * *
61500 ATATCTATATTTATCTAACGAAATCTCAGTCACATTGGATTTAAGGATTTGTTTTTATGAGCATA
451 ATATCTATATTTATCTAACGAAATCTCAGCCACATTGGATTTAAGGA-TTGTTTTTAGGAGCATC
* *
61565 TCAATTCGGTTTCGATTTAATTAGAAATTAACTCGGAAAAATAGAAAAAAATAATATTAGAAGCG
515 TCAATTCGGTTTCGATTTAATTAGAAATTAATTCGGAAAAATAGAAAAAAACAATATTAGAAGCG
**
61630 TGAGAAGCCCTTCAATAATTTT-GCATTGAATTATATATTTTTATGAATATGGTGGCTA--GAAA
580 TGAGAAGCCCTTCAATCTTTTTGGCATTGAATTATATATTTTTATGAATATGGTGGCTACGGAAA
61692 TTGAGGAGAAA
645 TTGAGGAGAAA
**
61703 TTTCTCGGATCAATTTTTGCAAAATTTTAGATGAAATTGTGTCGGCACGATTTTT
1 TTTCTCGG-TCAATTTTTGCAAAATTTTAGATGAAATTGTGTCATCACGATTTTT
61758 GGCGCCAAGT
Statistics
Matches: 1220, Mismatches: 123, Indels: 85
0.85 0.09 0.06
Matches are distributed among these distances:
652 2 0.00
653 61 0.05
655 30 0.02
656 215 0.18
657 14 0.01
658 69 0.06
659 4 0.00
661 12 0.01
662 20 0.02
663 149 0.12
664 15 0.01
665 39 0.03
666 5 0.00
667 122 0.10
668 182 0.15
669 224 0.18
670 6 0.00
672 2 0.00
673 3 0.00
674 1 0.00
675 45 0.04
ACGTcount: A:0.32, C:0.15, G:0.17, T:0.35
Consensus pattern (655 bp):
TTTCTCGGTCAATTTTTGCAAAATTTTAGATGAAATTGTGTCATCACGATTTTTCACTAAAAACG
CATTCCGGATCCCTAACTCAGTTTTGCACAATTTTTGGCGCCAAGTCTCATTGAAATATCTATAT
CCATCTAACCAAATCTTACCCACATTGGATTTAAGGATTTGTTTTTACGAGCATATGAATCATGT
TTCGGTTCAATTAGGAATTAATCGGAAAAAATAGGAAAAATGATATTGGAAGCGTGAATAGCCTT
TCAATCTTTTTGGTGTTGAATTATATATTTTTTATTAGTATCGTGGCCGAAAATTGAGGAAAATT
CTTTCGGGTCAATTTTTAAAAAATTGTAGCCAAAATCGTGTACTAACTATCACGATTTTTGGCTA
AAATCGCGTTCCGGGCCCCGACTCAGTTTTGCATGATTTTTGGCGCCAAGACTCATTGAAATATC
TATATTTATCTAACGAAATCTCAGCCACATTGGATTTAAGGATTGTTTTTAGGAGCATCTCAATT
CGGTTTCGATTTAATTAGAAATTAATTCGGAAAAATAGAAAAAAACAATATTAGAAGCGTGAGAA
GCCCTTCAATCTTTTTGGCATTGAATTATATATTTTTATGAATATGGTGGCTACGGAAATTGAGG
AGAAA
Found at i:62234 original size:606 final size:609
Alignment explanation
Indices: 61140--62351 Score: 1898
Period size: 606 Copynumber: 2.0 Consensus size: 609
61130 GGCTCATTTT
* * * *
61140 GCACAATTTTTGGGGCCAAGTCTAATTGAAATATCTATATCCATTTAACCAAATCTTACCCATAT
1 GCACAATTTTTGGCGCCAAGTCTAATTGAAATACCTATATCCATCTAACCAAATCTTACCCACAT
* * * *
61205 TGGATTTAAGGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATACG
66 TGGATTTAAGCACTTGCTTTTACGAACATATGAATCATGTTTCGATTCAATTAGGAATTAATACG
* * *
61270 GAAAAAATAGGAAAAATGATATTGGAAACGTGAATAGCCTTTCAGTCTTTTTGGTGTTGAATTAT
131 GAAAAAATAGGAAAAATGATATTAGAAACGTGAATAGCCTTTCAATCTTTTTGGTGTTGAATGAT
*
61335 ATATTTTTTATTAATATCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTAAAAAAT
196 ATATTTTTTATTAATATCGTGGCCGAAAATTGAGGAAAATTATTTCGGATCAATTTTTAAAAAAT
*
61400 TGTAGCCAAAATCGTGTACTAACTATCACGATTTTGGGCTAAAATCGCGTTCCGGGGCCCCGTCT
261 TGTAGCCAAAATCGTGTACTAACTATCACGATTTTGGGCTAAAATCGCGTTCCGGGGCCCCGGCT
* *
61465 CAGTTTTGCATGATTTTTGGCGCCGACTCATTGAAATATCTATATTTATCTAACGAAATCTCAGT
326 CAGTTTTGCATGATTTTTGGCGCAGACTCATTGAAATATCTATATTTATCTAACGAAATCTCAGC
* *
61530 CACATTGGATTTAAGGATTTGTTTTTATGAGCATATCAATTCGGTTTCGATTTAATTAGAAATTA
391 CACATTGGATTTAAGGATTTGTTTTTATCAACATATCAATTCGGTTTCGATTTAATTAGAAATTA
*
61595 ACTCGGAAAAATAGAAAAAAATAATATTAGAAGCGTGAGAAGCCCTTCAATAATTTTGCAT-T-G
456 ACTCGGAAAAATAGAAAAAAATAATATTAGAAGCGTGAGAAACCCTTCAATAATTTTG-ATGTCG
*
61658 AATTATATA-TTTTTATGAATATGGTGGCTAGAAATTGAGGAGAAATTTCTCGGATCAATTTTTG
520 AATTATATATTTTTTATGAATATGGTGGCCAGAAATTGAGGAGAAATTTCTCGGATCAATTTTTG
61722 CAAAATTTTAGATGAAATTGTGTCG
585 CAAAATTTTAGATGAAATTGTGTCG
* *
61747 GCACGATTTTTGGCGCCAAGTCTCATTGAAATACCTATATCCATCTAACCAAATCTTACCCACAT
1 GCACAATTTTTGGCGCCAAGTCTAATTGAAATACCTATATCCATCTAACCAAATCTTACCCACAT
* * * *
61812 TGGATTTAAGCACTTGCTTTTACGAATATATGAATCATGTTTCGGTTCAATTTGGAATTAATTC-
66 TGGATTTAAGCACTTGCTTTTACGAACATATGAATCATGTTTCGATTCAATTAGGAATTAATACG
* * * *
61876 GAAAAAATTGGAAAAATGATATTAGAAGCGTGAATAGGCTTTCAATCTTTTTGGTGTTGAATGGT
131 GAAAAAATAGGAAAAATGATATTAGAAACGTGAATAGCCTTTCAATCTTTTTGGTGTTGAATGAT
* * *
61941 ATATTTTTTATTAGTATCGTGGCTGAAAATTGAGGAAAATTATTTCGGATCAATTTTTACAAAAT
196 ATATTTTTTATTAATATCGTGGCCGAAAATTGAGGAAAATTATTTCGGATCAATTTTTAAAAAAT
* * ** *
62006 TGTAGCCGAAATCGTGTACTAACTATCACGGTTTTTTGCTTAAATCGCGTTCCGGGGCCCCGGCT
261 TGTAGCCAAAATCGTGTACTAACTATCACGATTTTGGGCTAAAATCGCGTTCCGGGGCCCCGGCT
* * *
62071 TAGTTTTGCATGATTTTTGGTGTCAAGACTCATTGAAATATCTATATTTATCTAACGAAATTTCA
326 CAGTTTTGCATGATTTTTGGCG-C-AGACTCATTGAAATATCTATATTTATCTAACGAAATCTCA
* *
62136 GCCACATTGGATTTAAGGATTTGTTTTTA-CAACATCTCAATT-TGTTTCGATTTAATTAGAAAT
389 GCCACATTGGATTTAAGGATTTGTTTTTATCAACATATCAATTCGGTTTCGATTTAATTAGAAAT
* * * *
62199 TAATTTGG-AAAATAGAAAAAAAATAATATTAGAAGCGTGAGAAACCCTTCATTAATTTTGGTGT
454 TAACTCGGAAAAATAG-AAAAAAATAATATTAGAAGCGTGAGAAACCCTTCAATAATTTTGATGT
* * *
62263 CGAATTATATATTTTTTATGAATATGGTGGCCGGAAATTGAGTAGAAATTTCTCGGGTCAATTTT
518 CGAATTATATATTTTTTATGAATATGGTGGCCAGAAATTGAGGAGAAATTTCTCGGATCAATTTT
62328 TGCAAAATTTTAGATGAAATTGTG
583 TGCAAAATTTTAGATGAAATTGTG
62352 GCATCACAGT
Statistics
Matches: 550, Mismatches: 49, Indels: 11
0.90 0.08 0.02
Matches are distributed among these distances:
605 8 0.01
606 267 0.49
607 136 0.25
608 139 0.25
ACGTcount: A:0.32, C:0.13, G:0.18, T:0.37
Consensus pattern (609 bp):
GCACAATTTTTGGCGCCAAGTCTAATTGAAATACCTATATCCATCTAACCAAATCTTACCCACAT
TGGATTTAAGCACTTGCTTTTACGAACATATGAATCATGTTTCGATTCAATTAGGAATTAATACG
GAAAAAATAGGAAAAATGATATTAGAAACGTGAATAGCCTTTCAATCTTTTTGGTGTTGAATGAT
ATATTTTTTATTAATATCGTGGCCGAAAATTGAGGAAAATTATTTCGGATCAATTTTTAAAAAAT
TGTAGCCAAAATCGTGTACTAACTATCACGATTTTGGGCTAAAATCGCGTTCCGGGGCCCCGGCT
CAGTTTTGCATGATTTTTGGCGCAGACTCATTGAAATATCTATATTTATCTAACGAAATCTCAGC
CACATTGGATTTAAGGATTTGTTTTTATCAACATATCAATTCGGTTTCGATTTAATTAGAAATTA
ACTCGGAAAAATAGAAAAAAATAATATTAGAAGCGTGAGAAACCCTTCAATAATTTTGATGTCGA
ATTATATATTTTTTATGAATATGGTGGCCAGAAATTGAGGAGAAATTTCTCGGATCAATTTTTGC
AAAATTTTAGATGAAATTGTGTCG
Found at i:63435 original size:332 final size:331
Alignment explanation
Indices: 61751--73367 Score: 10624
Period size: 332 Copynumber: 34.9 Consensus size: 331
61741 GTGTCGGCAC
* * ** * *
61751 GATTTTTGGCGCCAAGTCTCATTGAAATACCTATATCCATCTAACCAAATCTTACCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * ** * * * *
61816 TTT-AAGCACTTGCTTTTACGAATATATGAATCATGTTTCGGTTCAATTTGGAATTAATTC-GAA
66 TTTAAAG-ATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAA
* * * **
61879 AAAATTGG-AAAAATGATATTAGAAGCGTGA-ATAGGCTTTCAATCTTTTTGGTGTTGAATGGTA
130 AAAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATA
* * * *
61942 TATTTTTTATTAGTATCGTGGCTGAAAATTGAGGAAAATTATTTCGGATCAATTTTTACAAAATT
194 TATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATT
* * * * * *
62007 GTAGCCGAAATCGTGTACTAACTATCACGGTTTTTTGCTTAAATCGCGTTCCGGGGCCCCGGCTT
259 TTAGCCGAAATCGTGTACT-A-TATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTC
62072 AGTTTTGCAT
322 AGTTTTGCAT
* * * *
62082 GATTTTTGGTGTCAAGACTCATTGAAATATCTATATTTATCTAACGAAATTTCAGCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * * * *
62147 TTTAAGGATTTGTTTTTAC-AACATCTCAAT-TTGTTTCGATTTAATTAGAAATTAATTTGG--A
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * ** *
62208 AAATAGAAAAAAAATAATATTAGAAGCGTGAGAAACCCTTCATTAATTTTGGTGTCGAATTATAT
131 AAATAG-GAAAAAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * * * * *
62273 ATTTTTTATGAATATGGTGGCCGGAAATTGAGTAGAAATT-TCTCGGGTCAATTTTTGCAAAATT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGA-AAATTCTTTCGGGTCAATTTTTACAAAATT
** * * * ** * * * * *
62337 TTAGATGAAATTGTG-GC---ATCACAGTTTTTAACTAAATACGCATTCCGGAGCCCTGGCTCAG
259 TTAGCCGAAATCGTGTACTATATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTCAG
* *
62398 TTTTGTAC
324 TTTTGCAT
* * * * ** * * *
62406 GAGTTTTGACGCCAAGTCTAATTGAAATATCTATATCCATCTAACCAAATCTTACCCACATTGTA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * * *
62471 TTTAAGGATTTGTTTTTACGAGCATATGAATCAAGCTTCGATTCAATTATG-AATTAGTTCGGAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTA-GAAATTAATTCGGAA
* * * * **
62535 TAAATAGG-GAAAATAATATTGGAAGCGTGA-ATAGCTTTTCAATCTTTTTAATGTTGAATTATA
130 AAAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATA
* * * * * * * *
62598 TAATTTTTATCAGTCTCGTGGCCAAAAATTGAGTAAAATTTTTTCGAGACAATTTTTACAAAATT
194 TATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATT
* * * * ** * * * *
62663 TTAGACGAAATTGAGTATTAACTATCACGACTTTTGGCTAAAAACGCGTTCCGGGTCACTGGCTC
259 TTAGCCGAAATCGTGTACT-A-TATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTC
62728 AGTTTTGCAT
322 AGTTTTGCAT
* * * * * *
62738 GATTTTTGGCACCAGGATTCATTAAAATATCTATATTTTTCTAACAAAATCTCAAG-CACATTGG
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTC-AGCCACATTGG
* * * * *
62802 AATTT-AAGATTTGTTTTTACGAGCGTCTCAATTC-TGTTTCGATTTAATTTGAAACTAATTCGG
65 -ATTTAAAGATTTGTTTTTACGAGCATCTGAA-TCATGTTTCGATTCAATTAGAAATTAATTCGG
** * * * *
62865 -AAAAATA-GAAAAAGCAATATTAGATGCGTGAGAAGCAC-TTCAATCTTTTT-GTCATTTAATC
128 AAAAAATAGGAAAAAATAATATTAGAAGCGTGAGAAGC-CTTTCAATCTTTTTGGT-GTTGAATT
* * * * *
62926 ATACATTTTTTATGAATATGGTGGCCG-AAATTGAGGAGAAATT-TTTTGGGTCAATTTTTGCAA
191 ATATATTTTTTATGAGTATCGTGGCCGAAAATTGAGGA-AAATTCTTTCGGGTCAATTTTTACAA
** * * * * **
62989 AATTTTAGTTGAAATCGTGTACTATCCATCACGATTTTTGAG-TAAAAACGTGTTCCCGACCCCC
255 AATTTTAGCCGAAATCGTGTACTAT--ATCACGGTTTTTG-GCTAAAAACGCGTTTCGGGGCCCC
*
63053 GGCTCAGTTTTGCAC
317 GGCTCAGTTTTGCAT
* * * * * * **
63068 GATTTTTGGCACCAAGTCTCATTGGAATATCTATATCTATCTAACCAAATCTTACCCATTTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * * * *
63133 TTTAAAGATTTGCTGTTACGAGCATATGAATCATGTTTCGGTTCAATTAGAAATTAATTTGAAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * *
63198 AAATAGGAAAAAATGATATTGGAAGCATGA-ATAGCCTTTCAATCTTTTTGGTGTTGAATTATAT
131 AAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATAT
** * * * * *
63262 ATTTTTTATGAGTCCCGTAGCCGAAAATTGAGGAAAATTGTTTCGGATGAATTTTTATAAAATTT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTT
* * *
63327 TAGCCGAAATCGTGTACGT-TATCGCGGTTTTTGGCTAAAAACGCGTTTCGGGGACCCGACTCAG
260 TAGCCGAAATCGTGTAC-TATATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTCAG
*
63391 TTTTGTAT
324 TTTTGCAT
* * * * * * *
63399 GATTTTTTTGCGCCAATACTTATTGAAACATCTATATTTATCTAACAAAATCTCAGGCACGTTGG
1 GA-TTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGG
* * * * *
63464 ATTTAAGGATTTGCTTTTACGAGCATCTCAAT-TTGATTTCGATTTAATTAGAAATTAATTCGGA
65 ATTTAAAGATTTGTTTTTACGAGCATCTGAATCATG-TTTCGATTCAATTAGAAATTAATTCGGA
* * **
63528 AAAAATA-GAAAAAACAATATTAGAAGCGTGAGAAGCCCTTCAATCTTTTTGACGTTGAATTATA
129 AAAAATAGGAAAAAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATA
* ** * **
63592 TA-TTTTTATGAGTATTGTGG-TTAAAATTTGTGGAAAATTCTTTCTCGTCAATTTTTACAAAAT
194 TATTTTTTATGAGTATCGTGGCCGAAAA-TTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAAT
* * *
63655 TTTAGCCGAAATCAGTGTACTAACTATCACGGTTTTTGGCAAAAAAACGCG-TTCTAGGGTCCCG
258 TTTAGCCGAAATC-GTGTACT-A-TATCACGGTTTTTGGC-TAAAAACGCGTTTC-GGGGCCCCG
63719 GCTCAGTTTTGCAT
318 GCTCAGTTTTGCAT
** * ** * *
63733 GATTTTTGGCATCAAGACTAATTCTAATATCTATATTTATCTAGCAAAATCTCAGCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * ** * *
63798 TTTAAGGATTT-TTTTTACGAGCATCTCAATCCGGTTTCGATTTAATTAGAAATTAATTC-AAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * * *
63861 AAATAGAAAACAAACAATATTAGAAGCATGAGAAGTCATTCAATCTTTTTGGTGTTGAATTATAA
131 AAATAGGAAA-AAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * * * * * *
63926 ATTTTTAATGAATGTGGTGGCCGGAAATTGAGGAGAAATT-TCTCGGGTCAATTTTTGCAAAATT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGA-AAATTCTTTCGGGTCAATTTTTACAAAATT
* * * * ** *
63990 TTAGCTGAAATCGTGTACTA-ACCCTCACGATTTTTGAG-TAAAATCGCGTTCCGGACCCCCAGC
259 TTAGCCGAAATCGTGTACTATA---TCACGGTTTTTG-GCTAAAAACGCGTTTCGGGGCCCCGGC
64053 TCAGTTTTGCAT
320 TCAGTTTTGCAT
* * * * ** * * **
64065 GATTTTTGGGGCCAAGTCTCATTGAAATATATTTATCAATCTAACCAAATCTTACCCATGTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * * * *
64130 TTTAAATATTTGTTTTTACGAGCATATGAATCGTGTTTCGGTTCAATTAGGAATTATTTCGGAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * *
64195 AAATAGG-AAAAATGATATTGGAAGCATGA-ATAGCCTTTCAATCTTTTTTGTATTGAATTATAT
131 AAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATAT
** * *
64258 ATTTTTTATGAGTCCCATGGCCGAAAATTGAGGAAAATTCTTTCGGGTGAATTTTTACAAAATTT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTT
* ** *
64323 TAGCCGAAATCGTG-----TATCACGGTTTTTGGCTAAAAACGCGTTCCGGGGATCCGGCTAAGT
260 TAGCCGAAATCGTGTACTATATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTCAGT
64383 TTTGCAT
325 TTTGCAT
* * * * * * * *
64390 GATTTTTGGCGCCAAGACTTATTGGAACATCTATATTTATCTAACAAAATATCTGCTACGTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * * ** *
64455 TTTAAGGATTTGTTTTTACGAGAATCTTAAT--TCGATTTCGATTTAAGGAGAAATTAAATC-GA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCAT-G-TTTCGATTCAATTAGAAATTAATTCGGA
* * * * *
64517 AAAAATAGAAAAAAAT-ATATTAGAAGTGTGAGAAGCCCTTCAATCATTTTGGCGTTGAATTATA
129 AAAAATAGGAAAAAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATA
* ** * * *
64581 TATTTTTTATGAGTATTGTGGCTAAAAATTGTA-GAAATTTTTTTCTGGTCAATTTTTACAAAAT
194 TATTTTTTATGAGTATCGTGGCCGAAAATTG-AGGAAAATTCTTTCGGGTCAATTTTTACAAAAT
* * * *
64645 TTTAGCCTAAATCGGTGTACTAACTATCACGATTTTTGGCAAAAAAAAAAAAAACGCG-TTCTAG
258 TTTAGCCGAAATC-GTGTACT-A-TATCACGGTTTTTGGC--------TAAAAACGCGTTTC-GG
* * * *
64709 GGCCTCGACTAAGTTTTGTAT
311 GGCCCCGGCTCAGTTTTGCAT
* * * * * *
64730 GATTTTTGGCGTCAAGAATCATTGAAATATTTATATTTATCTAACGAAAACTCATCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * ** * *
64795 TTT-ATGATTTGTTTTTACGAGCATCTCAATCCGGTTTCGATTTAATTAGAAATTAATTC-AAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * * ** *
64858 AAATAGAAAACAAACAATATTAGAAGCGTGAGAAACCCTTCAATATTTTTGACGATGAATTATAT
131 AAATAGGAAA-AAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * * * * *
64923 ATTTTTTTATGAGTATTC-TAG-CAAAAAGTTGTGGAAAATACATTCTGGTCAATTTTTACAAAA
195 A-TTTTTTATGAGTA-TCGTGGCCGAAAA-TTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAA
* * * *
64986 TCTTAGCCGAAATCGGTGTACTAACTATCACGGTTTTTGGCAAAAAAAAAAATGCG-TTCTAGGG
257 TTTTAGCCGAAATC-GTGTACT-A-TATCACGGTTTTTGGC-----TAAAAACGCGTTTC-GGGG
*
65050 CCCCGGCTTAGTTTTGCAT
313 CCCCGGCTCAGTTTTGCAT
* * * *
65069 GATTTTTGGCGTCAACACTCATTGAAATATCTATATTTAGCTATCCAAATCTCAGCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * *
65134 TTTAAATG-TTTGTTTTTACGAGCGTATGAATCATGTTTCGATTCAATTAGGAATTAATTCGGAA
66 TTTAAA-GATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAA
* * * * *
65198 AAAATA-GAAAAAATATTATTAGAAGCGTGAAAAGCATTTCAATCTTTTTGATATTGAATTATAT
130 AAAATAGGAAAAAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * * * *
65262 ATTTTTTATGACTATCATGGCCAAAAATTGAGGAAAATTCTTTTGGGTCAATTTTTGCAAAATTT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTT
* * * * * * *
65327 TAGCGGAAACCGTGCACTAACTATCACGGTTTTTGGCTAAAAACGTGTTCCGGGGCCCCGACACA
260 TAGCCGAAATCGTGTACT-A-TATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTCA
*
65392 GTTTGGCAT
323 GTTTTGCAT
* ** * * * *
65401 GATATTTGGAACCAAGACTAATTGAAATATCTATATTTATCTAGCGAAATCTCGGCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * **
65466 TTTAAGGATTTGTTTTTACGAGCATCTAAATCCGGTTTCGAATT-AATTAGAAATTAATT---AA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCG-ATTCAATTAGAAATTAATTCGGAA
* * * *
65527 AAAA-AGGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGCGTTAAATTAT
130 AAAATAGG-AAA-AAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTAT
* * * * * * * *
65591 ACATTTTTAATGAATGTGGTGGCCGGAAATTGAGGAGAAATT-TCTCGGGTCAATTTTTGCAAAA
193 ATATTTTTTATGAGTATCGTGGCCGAAAATTGAGGA-AAATTCTTTCGGGTCAATTTTTACAAAA
* * * * * **
65655 TTTTAGCTGAAATCGTGTACTAACCATCACGATTTTTGAG-TAAAATCGCGTTCCGGACCCCCGG
257 TTTTAGCCGAAATCGTGTACT-A-TATCACGGTTTTTG-GCTAAAAACGCGTTTCGGGGCCCCGG
*
65719 CTCAGTTTTGCAC
319 CTCAGTTTTGCAT
* ** * * **
65732 GATTTTTGGCGCCAAGTCTCATTGAAATATCTATATCAATCTAACCAAATCTTACCCATGTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * * * *
65797 TTTAAAGATTCGTTTTTACGAGCATATGAATCGTGTTTCGGTTCAATTAGGAATTATTTCGGAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * *
65862 AAATA-GAAAAAACAATATTAGAAGCGTGAGAAGCCCTTCAATCTTTTTGGCGTTGAATTATATA
131 AAATAGGAAAAAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATATA
** * * * * *
65926 TTTTTTATGAGTATTATGG-CTAAAAGTTGTGGAAAACTCTTTCTGGTCAATTTTTACAGAATTT
196 TTTTTTATGAGTATCGTGGCCGAAAA-TTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTT
* * ** * *
65990 TAGCTGAAATCGGTGTACTAACTATCACGGTTTTTGGCAAAAAAAAACGTGTTCTAGGGTCCCGG
260 TAGCCGAAATC-GTGTACT-A-TATCACGGTTTTTGGC-TAAAAACGCGT-TTC-GGGGCCCCGG
*
66055 CTTAGTTTTGCAT
319 CTCAGTTTTGCAT
* *
66068 GATTTTTGGCATCC-AGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAACCACATTGG
1 GATTTTTGGC-GCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGG
* * * * *
66132 ATTTAAATATTTGTTTTTACGAGCGTATGAATCATGTTTCGATTCAATCAGGAATTAATTCGGAA
65 ATTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAA
* * * *
66197 AAAATA-GAAAAAATTATATTCGAAGCGTGA-ATAGCATTTCAATCTTTTTGGT-ATGAATTATA
130 AAAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATA
* * * * * * *
66259 TATTTTTTATGACTATTGTGGCTGAAAATTGAGGAAATTTATTTTGGGTCAATTTTTGCAAAATT
194 TATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATT
* * *
66324 TTAGCCGAAATCGTGTAGCCTAGCCTATCACAGTTTTTGGCTAAAAACGCGTTCCGGGGCCCCGA
259 TTAGCCGAAATCGTGTA--CTA---TATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGG
*
66389 CACAGTTTTGCAT
319 CTCAGTTTTGCAT
* * * *
66402 GATTTTTGACGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATATCAGCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * ** *
66467 TTTAAGGATTTGTTTTTACGAGCATCTCAATCCGGTTTCGATTTC-ATTAGAAATTAATTC-AAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGA-TTCAATTAGAAATTAATTCGGAA
* * * **
66530 AAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGCATTGAATTATA
130 AAAATAGGAAA-AAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATA
* * * * * * * *
66595 CATTTTTAATGAATGTGGTGGCCGGAAATTGAGGAGAAATT-TCTCGGGTCAATTTTTGCAAAAT
194 TATTTTTTATGAGTATCGTGGCCGAAAATTGAGGA-AAATTCTTTCGGGTCAATTTTTACAAAAT
* * * * **
66659 TTTAGCTGAAATCGTGTACGT-TATCACGATTTTTGAG-TAAAATCGCGTTCCGGACCCCCGGCT
258 TTTAGCCGAAATCGTGTAC-TATATCACGGTTTTTG-GCTAAAAACGCGTTTCGGGGCCCCGGCT
* *
66722 CAGTATTGCAC
321 CAGTTTTGCAT
* * ** * **
66733 GATTTTTGGCGCCAAGTCTAATTGAAATATCTATATCAATCTAACCAAAAT-T-ACCCATGTTGG
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACC-AAATCTCAGCCACATTGG
* * ** * * * *
66796 ATTTAAAGATTAGTTTTTACGAGCATTTGAATTGTGTTTCGGTTGAATTAGGAATTATTTCGGAA
65 ATTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAA
* * * *
66861 AAAATAGG-AAAAATGATATTGGAAGCATGA-ATAGTCTTTCAATCTTTTTGGTGTTGAATTATA
130 AAAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATA
** * * *
66924 TATTTTTTATGAGTCCCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTGAATTTGTACAAAATT
194 TATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATT
* * *
66989 TTTGCCGAAATCGTGTACGT-TATCACGGTTTTTGGCTAAAAACGCGTTCCGGGGACCCGGCTCA
259 TTAGCCGAAATCGTGTAC-TATATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTCA
67053 GTTTTGCAT
323 GTTTTGCAT
* * * * * *
67062 GATTTTTGGCGCCAAGAATTATTGGAACATCTATATTTATCTAACAAAATCTCAGCCACGTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * *
67127 TTTAAGGATTTGTTTTTACGAGCATCTCAAT--TCGATTTCAATTTAATTAGAAATTAATTCGGA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCAT-G-TTTCGATTCAATTAGAAATTAATTCGGA
* * * **
67190 AAAAATA-GAAAAAACAATATTAGAAGCGTGAGAAACCCTTCAATCTTTTTGACGTTGAATTATA
129 AAAAATAGGAAAAAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATA
* * * * * * *
67254 TATTTTCTATGAGTATTGTGG-CTAAAAGTTGTGGGAAATTCTTTCTGGTCAAGTTTTACAAAAT
194 TATTTTTTATGAGTATCGTGGCCGAAAA-TTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAAT
* * * *
67318 TTTAGCCGAAATCGGTGTAC-ACTATCACGATTTTTGGCAAAAAACGCG-TTCTAGGGCCCCGGT
258 TTTAGCCGAAATC-GTGTACTA-TATCACGGTTTTTGGCTAAAAACGCGTTTC-GGGGCCCCGGC
*
67381 TCAGTTTTTCAT
320 TCAGTTTTGCAT
* * * * *
67393 GATTTTTGGCGTCAAGATTCATTGAAATATCTATAGTTATCTAACGAAAACTCAGCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * ** *
67458 TTTAAGGATTTGTTTTTACGAGCATCTCAATCCGGTTTCGATTTAATTAGAAATTAATTC--AAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * *** *
67521 AAATAGAAAACAAACAATATTAGAAGCGTGAGAATCCATTCAATCTTTTTCACGTTGAATTATAC
131 AAATAGGAAA-AAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * * * * * * *
67586 ATTTTTAATGAATGTGGTGGCCGGAAATTGAGGGGAAATT-TCTCGGGTCAATTTTTGCAAAATT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGA-GGAAAATTCTTTCGGGTCAATTTTTACAAAATT
* * * * **
67650 TTAGCCTAAATCGTGTACTAACTATCACGATTTTTGAG-TAAAATCGCGTTCCGGACCCCCGGCT
259 TTAGCCGAAATCGTGTACT-A-TATCACGGTTTTTG-GCTAAAAACGCGTTTCGGGGCCCCGGCT
* *
67714 CAGTCTTGCAC
321 CAGTTTTGCAT
* * ** * * **
67725 GATTTTTGGCACCAAGTCTCATTGAAATATCTATATCAATCTAACCAAATCTTACCCATGTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * ** * * *
67790 TTTAAAGATTTCTTTTTACCAGCATATGAATTGTGTTTCGGTTGAATTAGGAATT-ATTCGGAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * * *
67854 AAATAGG-AAAATTGATATTGGAAGCATGA-ATAGTCTTTCAATCTTTTTGGTGTTCAATTATAT
131 AAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATAT
** *
67917 ATTTTTTATGAGTCCCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTGAATTTTTACAAAATTT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTT
* * *
67982 TAGCCGAAATTGTGTACGT-TATCACGGTTTTTGGCTAAAAACGCG-TTCTAGGGACCCGGCTCA
260 TAGCCGAAATCGTGTAC-TATATCACGGTTTTTGGCTAAAAACGCGTTTC-GGGGCCCCGGCTCA
68045 GTTTTGCAT
323 GTTTTGCAT
* * * * * *
68054 GATTTTGGGCGCCAAGAATTATT-AGAACATCTATATTTATCTAACAAAATCTCAGCCACGTTGG
1 GATTTTTGGCGCCAAGACTCATTGA-AATATCTATATTTATCTAACCAAATCTCAGCCACATTGG
* * *
68118 ATTT-AAGCATTTGTTTTTACGAGCATCTCAAT--TCGATTTCGATTTAATTGGAAATTAATTC-
65 ATTTAAAG-ATTTGTTTTTACGAGCATCTGAATCAT-G-TTTCGATTCAATTAGAAATTAATTCG
* * * *
68179 GAAATAATAGAAAAAAACAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGCGTTGAATTA
127 GAAAAAATAGGAAAAAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTA
* * * *
68244 TATATTTTTTATGAGTATTGTGG-CTAAAAGTTGTGGAAAATTCTTTCTGGTCAATTTTTACAAA
192 TATATTTTTTATGAGTATCGTGGCCGAAAA-TTGAGGAAAATTCTTTCGGGTCAATTTTTAC-AA
* * * *
68308 AATTTTAGCCGAAATCGGTGTGTAGTAATATCACGGTTTTTGGCAAAAAAATGCG-TTCTAGGGC
255 AATTTTAGCCGAAATC---GTGTACT-ATATCACGGTTTTTGGC-TAAAAACGCGTTTC-GGGGC
* * *
68372 CCCGACTCAGTTTTGGAC
314 CCCGGCTCAGTTTTGCAT
*
68390 GATTTTTGGCGTCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * * * *
68455 TTTAAATATTTGTTTTTTCGAGCGTATGAATCATGTTTCGATTCAATTAGGAATTAATTCCG-AA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * **
68519 AAAGA-GAAAAAATTATATTAGACGCGTGA-ATAGCATTTCAATCTTTTTGGAATTGAATTATAT
131 AAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * * * *** *
68582 ATTTTGTATGACTATCGTGGCCAAAAATTGAGGAAAATTATTTTTTGTCAATTTTT-TAAAATTT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTT
* * * *
68646 TAGCCGAAATCGTGTACTAACTAACACTGTTTTTGTCTAAAAACGCGTTCCGGGGCCCCGGCAT-
260 TAGCCGAAATCGTGTACT-A-TATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGC-TC
*
68710 AGTTCTGCAT
322 AGTTTTGCAT
* * * * *
68720 GATTTTTGGCGCCAAGACTAATTGAAATTTCTATATTTATCTAGCGAAATCTCAACCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * ** **
68785 TTTAAGGATTTGTTTTTACGAGCATCTCAATCCGGTTTCGAATT-AATTAGAAATTAATTCAAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCG-ATTCAATTAGAAATTAATTCGGAA
* * * * * *
68849 AAAATAGAAAACAAACAATATTAGAAACGTGAGAAGCCATTCAATCTTTTTAGCGTTGAATTATA
130 AAAATAGGAAA-AAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATA
* * * * * * * * *
68914 CATTTTTAATGAATGTGGTGGCCGCAAATTGAGGTTAAATT-TCTT-GGGTTAATTTTTGCAAAA
194 TATTTTTTATGAGTATCGTGGCCGAAAATTGAGG-AAAATTCT-TTCGGGTCAATTTTTACAAAA
* * * * * * * *
68977 TTTTAACTGAAATCATGTACTAACCATCACGATATTTGAG-TAAAAACGCG-TTCCGGACCTCCG
257 TTTTAGCCGAAATCGTGTACT-A-TATCACGGTTTTTG-GCTAAAAACGCGTTTCGGGGCC-CCG
*
69040 GCTCAGTTTTGCAC
318 GCTCAGTTTTGCAT
* * * * * ** * * **
69054 AATTATTGGGGCCAAGTCTCATTGACATATCTATATCAATCTAACCAAATCTTACCCATGTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * * * *
69119 TTTAAAGATTTCTTTTTACCAGCATATGAATCGTGTTTCAATTCAATTAGGAATTAATTCGGAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * * * *
69184 AAATAGG-AAAAATGATATTGGAAGCATGA-ATAGCCTTTCAATCTTTTTGTTATTTAACTATAT
131 AAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATAT
** *
69247 ATTTTTTATGAGTCCCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTGAATTTTTACAAAATTT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTT
* * * * *
69312 TAGCCGAAATCGTGGACGT-TATCATGGTTTTTGGCTAAAAACGCGTTTCGAGGACCCGGCTCAA
260 TAGCCGAAATCGTGTAC-TATATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTCAG
69376 TTTTGCAT
324 TTTTGCAT
* * * * * *
69384 GATTTTTGGCGCCAAGACTTATTGAAACATCTATATTTATGTAACAAAATCTCGGCCACGTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * *
69449 TTTAAGGATTTGTTTTTACGAGCATCTCAATTCA-ATTTCGATTTAATTAGAAATTAATTCGGAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAA-TCATGTTTCGATTCAATTAGAAATTAATTCGGAA
* * * **
69513 AAAATA-GAAATAAACAATATTAGAAGCGTGAGAAGCCCTTCAATATTTTTGACGTTGAATTATA
130 AAAATAGGAAA-AAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATA
* ** * * *
69577 TATTTTTTATGAGTATTGTGGCTAAAAATTGTGGAAATTTCTTTCTGGTCAATTTTTACAAAATT
194 TATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATT
* * ** **
69642 TTAGCCGAAATCGGCGTACGTTATATCACGGTTTTTGGCAAAAAAAAAACGTGTTCTAAGG-CCC
259 TTAGCCGAAATC-GTGTAC--TATATCACGGTTTTTGGC--TAAAAACGCGT-TTC-GGGGCCCC
69706 GGCTCAGTTTTGCAT
317 GGCTCAGTTTTGCAT
*
69721 GATTTTTGGCGTCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * *
69786 TTTAAATATTTGTTTTTACGAGCGTATGAATCATGTTTCGATTCAATTACG-AATTAATTCGGAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTA-GAAATTAATTCGGAA
* * * ** *
69850 AAAGTAGG-AAAAATGATATTAGAAGCGTGA-ATAGCATTTCAATCTTTTTGGAATCGAATTATA
130 AAAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATA
* * * *
69913 TATTTTTTTATGACTATCGTGGCCAAAAATTGAGGAAAATTCTTTTGTGTCAATTTTTGA-AAAA
194 TA-TTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTT-ACAAAA
* * ** *
69977 TTATAGCCGAAATCATGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTACCGTGGCCCCGGC
257 TTTTAGCCGAAATCGTGTACT-A-TATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGC
*
70042 TCAGGTTTGCAT
320 TCAGTTTTGCAT
* * * *** * ** * ****
70054 GATTCTTGGCGCCAAGACTAATTGAAATATTACTGTAAAAAAAGACTAATTGAAATATCTATATT
1 GATTTTTGGCGCCAAGACTCATTGAAATA-T-C--TATATTTA-TCTAA-CCAAATCTC-AGCCA
* * * * ** * * ** * * *
70119 TATTTAGCGAAATCT-CAGCCACATTGGATTTAAGGGTTTGTTTTTATGAGCAT-TTCAATCTGA
59 CA-TT-G-G--ATTTAAAG--A-TTTGTTTTTACGAG---CATCTGA--ATCATGTT---TC-GA
* * * * *
70182 TTTCGATTTAATTAGAAATTAATTC-AAAAAAATAGAAAACAAACAATATTAGAAGCGTGAAAAG
107 -TTC-AATT-A---GAAATTAATTCGGAAAAAATAGGAAA-AAATAATATTAGAAGCGTGAGAAG
* * * * * * * *
70246 CCATTCAA--TTTTTGGCGTTGAATTATACATTTTTAATGAATGTGGTGGCCGGAAATTGAGGAG
165 CCTTTCAATCTTTTTGGTGTTGAATTATATATTTTTTATGAGTATCGTGGCCGAAAATTGAGGA-
* * * * *
70309 AAATT-TCTCGGGTCAATTTTTGCAAAATTTTAGCTGAAATCGTGTACTAACCATCACGATTTTT
229 AAATTCTTTCGGGTCAATTTTTACAAAATTTTAGCCGAAATCGTGTACT-A-TATCACGGTTTTT
* ** ** *
70373 GAG-TAAAAACGTG-TTCTGGACCCCCGGCTCAGACTTGCAC
292 G-GCTAAAAACGCGTTTC-GGGGCCCCGGCTCAGTTTTGCAT
* * * ** * * *
70413 GATTTTTGGTGCCAAGTCTCTTTGAAATATCTATATCCATCTAACCAAATCTTACCCACGTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * *
70478 TTTAAAGATTTGCTTTTACGAGCATATGAATCATGTTTCGGTTCAATTAGGAATTAATTCGGAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * *
70543 AAATAGG-AAAAATGATATTGGAAGCATGA-ATAGCCTTTCAATCTTTTTGGTCTTGAATTATAT
131 AAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * * * *
70606 ATTTTTTACGAGTCTCGTTGCCGAAAATTGAGGAAATTTATTTCGGGTCAATTTTTGA-AAAATT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTT-ACAAAATT
* * * *
70670 TTAGCCGAAATCGTATACTAACTATCACAGTTTTTGG-TTAAAACGCGTTTCGGGGCCCCGACTC
259 TTAGCCGAAATCGTGTACT-A-TATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTC
*
70734 AGTTTTGCTT
322 AGTTTTGCAT
* * * * * *
70744 GATTTTTGGCGCCAAGACTAATTGAAATACCTATATTTATCTAGCGAAATCTCAACCACATTAGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * ** * **
70809 TTTAAGGATTTGTTTTTACGAACATCTCAATCCGGTTTCGATTAAATTAGAAATTAATTCAAAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * *
70874 AAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGCGTTGAATTATAC
131 AAATAGGAAA-AAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * * * * * *
70939 ATTTTTAATGAATGTGGTGGCCGCAAATTGAGGAGAAATT-TCTCGGGTCAATTTTTGCAAAATT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGA-AAATTCTTTCGGGTCAATTTTTACAAAATT
* * * * * * ** * *
71003 TTAGCTGAAATCGTGTACTAACCATCACGATTTTTGAG-TGAAAACGTGTTCCGGATCTCCAGCT
259 TTAGCCGAAATCGTGTACT-A-TATCACGGTTTTTG-GCTAAAAACGCGTTTCGGGGCCCCGGCT
* *
71067 CAGTCTTGCAC
321 CAGTTTTGCAT
* * ** * * *
71078 GATTTTTGGCGCCAAGTCTCTTTGAAATATCTATATCCATCTAACCAAATCTTATCCACGTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * *
71143 TTTAAAGATTTGCTTTTACGAGCATATGAATCATGTTTCGGTTCAATTAGGAATTAATTCGGAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * *
71208 AAATAGG-TAAAATGATATTGGAAGCATGA-ATAGCCTTTCAATCTTTTTGGTCTTGAATTATAT
131 AAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * * * * * *
71271 ACTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAATTTATTTCAGGTCAATTTTTGCGAAATTT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTT
* * * *
71336 TAGCCGAAATCTTGTAC-ATTATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGTCCCAGCTCAA
260 TAGCCGAAATCGTGTACTA-TATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTCAG
71400 TTTTGCAT
324 TTTTGCAT
* * * *
71408 GATTTTTGGCGCCAAGACTAATTGAAATACCTATATTTATCTAGCGAAATCTCAGCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * ** * **
71473 TTTAAGGATTTGTTTTTACGAGCATCTCAATCCGGTTTCGATTTAATTAGAAATTAATTCAAAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTC-GGAA
* * * * *
71538 AAAATTGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATC-TTTTGGCGTTGAATTATA
130 AAAATAGGAAA-AAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATA
* * * * * * * *
71602 CATTTTTAATGAATGTGGTGGCCGCAAATTGAGGAGAAATT-TCTCGGGTCAATTTTTGCAAAAT
194 TATTTTTTATGAGTATCGTGGCCGAAAATTGAGGA-AAATTCTTTCGGGTCAATTTTTACAAAAT
* * * * ** *
71666 TTTAGCTGAAATCGTGTACTAACTATCACGATTTTTGAG-TAAAAACGTGTTCCGGACCCCCAGC
258 TTTAGCCGAAATCGTGTACT-A-TATCACGGTTTTTG-GCTAAAAACGCGTTTCGGGGCCCCGGC
* *
71730 TCAGTCTTGCAC
320 TCAGTTTTGCAT
* * ** * * *
71742 GATTTTTGGCGCCAAGTCTCTTTGAAATATCTATATCCATCTAACCAAATCTTACCCACGTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * *
71807 TTTAAAGATTTGCTTTTACGAGCATATGAATCATGTTTCGGTTCAATTAGGAATTAATTCGGAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * *
71872 AAATAGG-AAAAATGATATTGGAAGCATGA-ATAGCCTTTCAATCTTTTTGGTCTTGAATTATAT
131 AAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* ** * * *
71935 ACTTTTTATGAGTCCCGTGGCCGAAAATTGAGGAAATTTATTTCGGGTCAATTTTTGCAAAATTT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTT
* **
72000 TAGCCGAAATCGTATACTAACTATCACGGTTTTTGGCTAGAAAACGCGTTTCGGGGCCCTAGCTC
260 TAGCCGAAATCGTGTACT-A-TATCACGGTTTTTGGCTA-AAAACGCGTTTCGGGGCCCCGGCTC
72065 AGTTTTGCAT
322 AGTTTTGCAT
* * * * *
72075 GATTTTTGGCGCCAAGACTAATTTAAATACCTATATTTATCTAGCGAAATCTCAGCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * ** * *
72140 TTTAAGGATTTGTTTTTACGAGCATCTCAATCCGGTTTCGATTTAATTAGAAATTAATTC-AAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * *
72204 AAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGCGTTGAATTATAC
131 AAATAGGAAA-AAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * * * * * *
72269 ATTTTTAATGAATGTGGTGGCCGCAAATTGAGGAGAAATT-TCTCGGGTCAATTTTTTCAAAATT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGA-AAATTCTTTCGGGTCAATTTTTACAAAATT
** * * * * * *
72333 TTAGTTGAAATCGTGTACTAACCATCACGATTTTTGAG-TAAAAACGTG-TTCTGGACCCCAGCT
259 TTAGCCGAAATCGTGTACT-A-TATCACGGTTTTTG-GCTAAAAACGCGTTTCGGGGCCCCGGCT
* *
72396 CAGTCTTGCAC
321 CAGTTTTGCAT
* * ** * * *
72407 GATTTTTGGCGCCAAGTCTCTTTGAAATATCTATATCCATCTAACCAAATCTTACCCACGTTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * *
72472 TTTAAAGATTTGCTTTTACGAGCATATGAATCATGTTTCGGTTCAATTAGGAATTAATTCGGAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* * * * * *
72537 AAATAGG-TAAAATGATATTGGAAGCATGA-ATAGCTTTTCAATTTTTTTGGTGTTGAATTATAT
131 AAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * * * * * *
72600 ATTTTTTATGAGTCTCGTCGCCGAAAATTGAGGAAATTTATTTCAGGTGAATTTTTATAAAATTT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTT
* * * * * *
72665 TAGCCGAAATCTTGTAC-ATTATCACGGTTTTTGGCTAAAAATGCGTTCCGCGGACCCGACTCAG
260 TAGCCGAAATCGTGTACTA-TATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTCAG
72729 TTTTGCAT
324 TTTTGCAT
** * * * * *
72737 GATTTTTTTACGCCAAGACTTATTGAAACATCTATATTTATTTAACAAAATCTCAGCCACTTTGG
1 GA-TTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGG
* * * *
72802 ATTT-AAGAATTTATTTTTACGAGCATCTCAAT--TCGATTTCGATTTAATTAGAAATTAATTCA
65 ATTTAAAG-ATTTGTTTTTACGAGCATCTGAATCAT-G-TTTCGATTCAATTAGAAATTAATTCG
* * * *
72864 GAAAAAATAGAAAAAAACAATATTAGAAGCGTGAGAAGCCCTTCAATTTTTTTGGTGTTGAATTA
127 GAAAAAATAGGAAAAAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTA
* * * *
72929 TATATTTTTTATGAGTATTGTGG-CTAAAAGTTGTGGAAAATTCTTTCTGGTCAATTTTTACAAA
192 TATATTTTTTATGAGTATCGTGGCCGAAAA-TTGAGGAAAATTCTTTCGGGTCAATTTTTACAAA
* *
72993 ATTTTAGCCAAAATCGGTGTACTAACTATCACGGTTTTTGGCAATAAAAAAACGCG-TTCTAGGG
256 ATTTTAGCCGAAATC-GTGTACT-A-TATCACGGTTTTTGGC--T--AAAAACGCGTTTC-GGGG
*
73057 CCCCGGCTCAATTTTGCAT
313 CCCCGGCTCAGTTTTGCAT
* * * *
73076 GATTTTTGGCGTCAAGACTCGTTGAAATATCTATATTTATCTGACAAAATCTCAGCCACATTGGA
1 GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
* * * * *
73141 TTTAAATATTTGTTTTTACGAGCTTGTGAATCATGTTTCGATTCAATTAGGAGTTAATTCGGAAA
66 TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
* *
73206 AAATA-GAAAAAATGATATTAGAAGCGTGA-ATAGCATTTCAATC---------TT---TT-TAT
131 AAATAGGAAAAAATAATATTAGAAGCGTGAGA-AGCCTTTCAATCTTTTTGGTGTTGAATTATAT
* * ** * *
73256 A-TTTTT-TGTGTATCGTGGCCAAAAATTGAGGAAAATTCTTTTTGGTTAATTTTTGCAAAA-TT
195 ATTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTT
73318 TAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTTT
260 TAGCCGAAATCGTGTACT-A-TATCACGGTTTTTGGCTAAAAACGCGTTT
73368 TGGTCAATAT
Statistics
Matches: 9166, Mismatches: 1783, Indels: 688
0.79 0.15 0.06
Matches are distributed among these distances:
316 9 0.00
317 2 0.00
318 1 0.00
320 26 0.00
321 12 0.00
322 41 0.00
323 11 0.00
324 229 0.02
325 161 0.02
326 125 0.01
327 2 0.00
328 38 0.00
329 420 0.05
330 1179 0.13
331 1562 0.17
332 1704 0.19
333 774 0.08
334 858 0.09
335 258 0.03
336 483 0.05
337 290 0.03
338 177 0.02
339 246 0.03
340 141 0.02
341 62 0.01
342 86 0.01
343 2 0.00
344 1 0.00
345 12 0.00
346 2 0.00
347 12 0.00
348 2 0.00
349 1 0.00
350 4 0.00
351 4 0.00
352 5 0.00
353 5 0.00
354 6 0.00
355 6 0.00
356 3 0.00
357 4 0.00
358 3 0.00
359 127 0.01
360 32 0.00
361 11 0.00
362 26 0.00
363 1 0.00
ACGTcount: A:0.32, C:0.15, G:0.18, T:0.36
Consensus pattern (331 bp):
GATTTTTGGCGCCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACATTGGA
TTTAAAGATTTGTTTTTACGAGCATCTGAATCATGTTTCGATTCAATTAGAAATTAATTCGGAAA
AAATAGGAAAAAATAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGGTGTTGAATTATATA
TTTTTTATGAGTATCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTCAATTTTTACAAAATTTT
AGCCGAAATCGTGTACTATATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGCCCCGGCTCAGTT
TTGCAT
Found at i:64237 original size:665 final size:662
Alignment explanation
Indices: 61747--73366 Score: 12161
Period size: 665 Copynumber: 17.5 Consensus size: 662
61737 AATTGTGTCG
* * * * * *
61747 GCACGATTTTTGGCGCCAAGTCTCATTGAAATACCTATATCCATCTAACCAAATCTTACCCACAT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * ** * *
61812 TGGATTT-AAGCACTTGCTTTTACGAATATATGAATCATGTTTCGGTTCAATTTGGAATTAATTC
66 TGGATTTAAAG-ATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTC
* * * * **
61876 -GAAAAAATTGGAAAAATGATATTAGAAGCGTGAATAGGCTTTCAATCTTTTTGGTGTTGAATGG
130 GGAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTA
* * * *
61940 TATATTTTTTATTAGTATCGTGGCTGAAAATTGAGGAAAATTATTTCGGATCAATTTTTACAAAA
195 TATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAAA
* * * * *
62005 TTGTAGCCGAAATCGTGTACTAACTATCACGGTTTTTTGCTTAAATCGCGTTCCGGGGCCCCGGC
260 TTTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCCCGGC
* * * * *
62070 TTAGTTTTGCATGATTTTTGGTGTCAAGACTCATTGAAATATCTATATTTATCTAACGAAATTTC
325 TCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATCTC
* **
62135 AGCCACATTGGATTTAAGGATTTGTTTTTAC-AACATCTCAATTTGTTTCGATTTAATTAGAAAT
390 AGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAATCGGTTTCGATTTAATTAGAAAT
* * * * * * * ** *
62199 TAATTTG-GAAAATAGAAAAAAAATAATATTAGAAGCGTGAGAAACCCTTCATTAATTTTGGTGT
455 TAATTCGAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGCGT
* * * * *
62263 CGAATTATATATTTTTTATGAATATGGTGGCCGGAAATTGAGTAGAAATTTCTCGGGTCAATTTT
520 TGAATTATATA-TTTTTATGAATGTGGTGGCCGAAAATTGAGGA-AAATTTTTCGGGTCAATTTT
** * * * * * * *
62328 TGCAAAATTTTAGATGAAATTGTG-GC-ATC-A-CA-G-TTTTTAACTAAATACGCATTC-CGGA
583 TGCAAAATTTTAGCCGAAATCGTGTACTAACTATCACGATTTTTGAGTAAAAACGCGTTCTCGG-
*
62386 GCCCTGGCTCAGTTTT
647 GCCCCGGCTCAGTTTT
* * * * * * * * *
62402 GTACGAGTTTTGACGCCAAGTCTAATTGAAATATCTATATCCATCTAACCAAATCTTACCCACAT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * * * * *
62467 TGTATTTAAGGATTTGTTTTTACGAGCATATGAATCAAGCTTCGATTCAATTATGAATTAGTTCG
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
* ** * * * * **
62532 GAATAAATAGGGAAAATAATATTGGAAGCGTGAATAGCTTTTCAATCTTTTTAATGTTGAATTAT
131 GAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTAT
* * * * * * *
62597 ATAATTTTTATCAGTCTCGTGGCCAAAAATTGAGTAAAATTTTTTCGAGACAATTTTTACAAAAT
196 ATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAAAT
* * * * ** * *
62662 TTTAGACGAAATTGAGTATTAACTATCACGACTTTTGGCTAAAAACGCGTTCCGG-GTCACTGGC
261 TTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTTCCGGAG-CCCCGGC
* * * * * * *
62726 TCAGTTTTGCATGATTTTTGGCACCAGGATTCATTAAAATATCTATATTTTTCTAACAAAATCTC
325 TCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATCTC
* * *
62791 AAG-CACATTGGAATTTAA-GATTTGTTTTTACGAGCGTCTCAATTCTGTTTCGATTTAATTTGA
390 -AGCCACATTGG-ATTTAAGGATTTGTTTTTACGAGCATCTCAA-TCGGTTTCGATTTAATTAGA
* * * *
62854 AACTAATTCGGAAAAATAG-AAA-AAGCAATATTAGATGCGTGAGAAG-CACTTCAATCTTTTTG
452 AATTAATTCGAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCA-TTCAATCTTTTTG
* * * * * * *
62916 TCATTTAATCATACATTTTTTATGAATATGGTGGCCG-AAATTGAGGAGAAATTTTTTGGGTCAA
516 GCGTTGAATTATATA-TTTTTATGAATGTGGTGGCCGAAAATTGAGGA-AAATTTTTCGGGTCAA
** * * * *
62980 TTTTTGCAAAATTTTAGTTGAAATCGTGTACTATCCATCACGATTTTTGAGTAAAAACGTGTTCC
579 TTTTTGCAAAATTTTAGCCGAAATCGTGTACTAACTATCACGATTTTTGAGTAAAAACGCGTTCT
**
63045 CGACCCCCGGCTCAGTTTT
644 CGGGCCCCGGCTCAGTTTT
* * * * * **
63064 GCACGATTTTTGGCACCAAGTCTCATTGGAATATCTATATCTATCTAACCAAATCTTACCCATTT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * * * *
63129 TGGATTTAAAGATTTGCTGTTACGAGCATATGAATCATGTTTCGGTTCAATTAGAAATTAATTTG
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
* *
63194 AAAAAAATAGGAAAAAATGATATTGGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTA
131 GAAAAAATA-GAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTA
* * * * * *
63259 TATATTTTTTATGAGTCCCGTAGCCGAAAATTGAGGAAAATTGTTTCGGATGAATTTTTATAAAA
195 TATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAAA
* * * * *
63324 TTTTAGCCGAAATCGTGTACGT---TATCGCGGTTTTTGGCTAAAAACGCGTTTCGGGGACCCGA
260 TTTTAGCCGAAATCGTGTAC-TAACTATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCCCGG
* * * * * *
63386 CTCAGTTTTGTATGATTTTTTTGCGCCAATACTTATTGAAACATCTATATTTATCTAACAAAATC
324 CTCAGTTTTGCATGA-TTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATC
* * * * *
63451 TCAGGCACGTTGGATTTAAGGATTTGCTTTTACGAGCATCTCAATTTGATTTCGATTTAATTAGA
388 TCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAA-TCGGTTTCGATTTAATTAGA
*
63516 AATTAATTCGGAAAAAATAG-AAA-AAACAATATTAGAAGCGTGAGAAGCCCTTCAATCTTTTTG
452 AATTAATTC-GAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTG
* * * * ** * **
63579 ACGTTGAATTATATATTTTTATGAGTATTGTGG-TTAAAATTTGTGGAAAATTCTTTCTCGTCAA
516 GCGTTGAATTATATATTTTTATGAATGTGGTGGCCGAAAA-TTGAGGAAAATT-TTTCGGGTCAA
* * *
63643 TTTTTACAAAATTTTAGCCGAAATCAGTGTACTAACTATCACGGTTTTTG-GCAAAAAAACGCGT
579 TTTTTGCAAAATTTTAGCCGAAATC-GTGTACTAACTATCACGATTTTTGAG--TAAAAACGCGT
* *
63707 TCTAGGGTCCCGGCTCAGTTTT
641 TCTCGGGCCCCGGCTCAGTTTT
* ** * ** * * * *
63729 GCATGATTTTTGGCATCAAGACTAATTCTAATATCTATATTTATCTAGCAAAATCTCAGCCACAT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * * ** * *
63794 TGGATTTAAGGATTT-TTTTTACGAGCATCTCAATCCGGTTTCGATTTAATTAGAAATTAATTC-
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
* ** * *
63857 AAAAAAATAGAAAACAAACAATATTAGAAGCATGAGA-AGTCATTCAATCTTTTTGGTGTTGAAT
131 GAAAAAATAG-AAA-AAATGATATTAGAAGCATGA-ATAGCCTTTCAATCTTTTTGGTGTTGAAT
* * * * * * * *
63921 TATAAATTTTTAATGAATGTGGTGGCCGGAAATTGAGGAGAAATT-TCTCGGGTCAATTTTTGCA
193 TATATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGA-AAATTATTTCGGGTCAATTTTTACA
* ** * * *
63985 AAATTTTAGCTGAAATCGTGTACTAACCCTCACGATTTTTGAG-TAAAATCGCGTTCCGGACCCC
257 AAATTTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTG-GCTAAAAACGCGTTCCGGAGCCC
* * * * * * ** *
64049 CAGCTCAGTTTTGCATGATTTTTGGGGCCAAGTCTCATTGAAATATATTTATCAATCTAACCAAA
321 CGGCTCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAA
* * ** ** * * * *
64114 TCTTACCCATGTTGGATTTAAATATTTGTTTTTACGAGCATATGAATCGTGTTTCGGTTCAATTA
386 TCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAATCG-GTTTCGATTTAATTA
* * * ** * * *
64179 GGAATTATTTCGGAAAAAATAG-GAA-AAATGATATTGGAAGCATGA-ATAGCCTTTCAATCTTT
450 GAAATTAATTC-GAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGA-AGCCATTCAATCTTT
* ** * ****
64241 TTTGTATTGAATTATATATTTTTTATGAGTCCCATGGCCGAAAATTGAGGAAAATTCTTTCGGGT
513 TTGGCGTTGAATTATATA-TTTTTATGAATGTGGTGGCCGAAAATTGAGGAAAATT-TTTCGGGT
* * *
64306 GAATTTTTACAAAATTTTAGCCGAAATCGTG-------TATCACGGTTTTTG-GCTAAAAACGCG
576 CAATTTTTGCAAAATTTTAGCCGAAATCGTGTACTAACTATCACGATTTTTGAG-TAAAAACGCG
** *
64363 TTC-CGGGGATCCGGCTAAGTTTT
640 TTCTC-GGGCCCCGGCTCAGTTTT
* * * * * * * * *
64386 GCATGATTTTTGGCGCCAAGACTTATTGGAACATCTATATTTATCTAACAAAATATCTGCTACGT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * * * * ** * *
64451 TGGATTTAAGGATTTGTTTTTACGAGAATCTTAAT--TCGATTTCGATTTAAGGAGAAATTAAAT
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCAT-G-TTTCGATTCAATTAGGAATTAATT
** * * *
64514 C-GAAAAAATAGAAAAAAAT-ATATTAGAAGTGTGAGA-AGCCCTTCAATCATTTTGGCGTTGAA
129 CGGAAAAAATAG-AAAAAATGATATTAGAAGCATGA-ATAGCCTTTCAATCTTTTTGGTGTTGAA
* * ** * * *
64576 TTATATATTTTTTATGAGTATTGTGGCTAAAAATTGTA-GAAATTTTTTTCTGGTCAATTTTTAC
192 TTATATATTTTTTATGAGTCTCGTGGCCGAAAATTG-AGGAAAATTATTTCGGGTCAATTTTTAC
* * *
64640 AAAATTTTAGCCTAAATCGGTGTACTAACTATCACGATTTTTGGCAAAAAAAAAAAAAACGCGTT
256 AAAATTTTAGCCGAAATC-GTGTACTAACTATCACGGTTTTTGGC--------TAAAAACGCGTT
* * * * * * * * *
64705 CTAGG-GCCTCGACTAAGTTTTGTATGATTTTTGGCGTCAAGAATCATTGAAATATTTATATTTA
312 C-CGGAGCCCCGGCTCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTA
* * *
64769 TCTAACGAAAACTCATCCACATTGGATTT-ATGATTTGTTTTTACGAGCATCTCAATCCGGTTTC
376 TCTAACGAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAAT-CGGTTTC
* * *
64833 GATTTAATTAGAAATTAATTCAAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAACCCTT
440 GATTTAATTAGAAATTAATTCGAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATT
* * * * * ** * * *
64898 CAATATTTTTGACGATGAATTATATATTTTTTTATGAGTATTCTAG-CAAAAAGTTGTGGAAAAT
505 CAATCTTTTTGGCGTTGAATTATATA--TTTTTATGAATGTGGTGGCCGAAAA-TTGAGGAAAAT
** * * * *
64962 ACATTCTGGTCAATTTTTACAAAATCTTAGCCGAAATCGGTGTACTAACTATCACGGTTTTTGGC
567 -TTTTCGGGTCAATTTTTGCAAAATTTTAGCCGAAATC-GTGTACTAACTATCACGATTTTT-G-
** * * *
65027 AAAAAAAAAAATGCGTTCTAGGGCCCCGGCTTAGTTTT
628 ---AGTAAAAACGCGTTCTCGGGCCCCGGCTCAGTTTT
* * * * * * *
65065 GCATGATTTTTGGCGTCAACACTCATTGAAATATCTATATTTAGCTATCCAAATCTCAGCCACAT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
*
65130 TGGATTTAAATG-TTTGTTTTTACGAGCGTATGAATCATGTTTCGATTCAATTAGGAATTAATTC
66 TGGATTTAAA-GATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTC
* * * * *
65194 GGAAAAAATAGAAAAAAT-ATTATTAGAAGCGTGAAAAGCATTTCAATCTTTTTGATATTGAATT
130 GGAAAAAATAGAAAAAATGA-TATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATT
* * * * * * *
65258 ATATATTTTTTATGACTATCATGGCCAAAAATTGAGGAAAATTCTTTTGGGTCAATTTTTGCAAA
194 ATATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAA
* * * * * *
65323 ATTTTAGCGGAAACCGTGCACTAACTATCACGGTTTTTGGCTAAAAACGTGTTCCGGGGCCCCGA
259 ATTTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCCCGG
* * * ** *
65388 CACAGTTTGGCATGATATTTGGAACCAAGACTAATTGAAATATCTATATTTATCTAGCGAAATCT
324 CTCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATCT
* * *
65453 CGGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTAAATCCGGTTTCGAATTAATTAGAA
389 CAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAAT-CGGTTTCGATTTAATTAGAA
65518 ATTAATT--AAAAAA-AGGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGG
453 ATTAATTCGAAAAAATA-GAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGG
* * * *
65580 CGTTAAATTATACATTTTTAATGAATGTGGTGGCCGGAAATTGAGGAGAAATTTCTCGGGTCAAT
517 CGTTGAATTATATATTTTT-ATGAATGTGGTGGCCGAAAATTGAGGA-AAATTTTTCGGGTCAAT
* * *
65645 TTTTGCAAAATTTTAGCTGAAATCGTGTACTAACCATCACGATTTTTGAGTAAAATCGCGTTC-C
580 TTTTGCAAAATTTTAGCCGAAATCGTGTACTAACTATCACGATTTTTGAGTAAAAACGCGTTCTC
*
65709 GGACCCCCGGCTCAGTTTT
645 GG-GCCCCGGCTCAGTTTT
* * * * *
65728 GCACGATTTTTGGCGCCAAGTCTCATTGAAATATCTATATCAATCTAACCAAATCTTACCCATGT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * * *
65793 TGGATTTAAAGATTCGTTTTTACGAGCATATGAATCGTGTTTCGGTTCAATTAGGAATTATTTCG
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
** * * *
65858 GAAAAAATAGAAAAAACAATATTAGAAGCGTGAGA-AGCCCTTCAATCTTTTTGGCGTTGAATTA
131 GAAAAAATAGAAAAAATGATATTAGAAGCATGA-ATAGCCTTTCAATCTTTTTGGTGTTGAATTA
* ** * * * * * *
65922 TATATTTTTTATGAGTATTATGG-CTAAAAGTTGTGGAAAACTCTTTCTGGTCAATTTTTACAGA
195 TATATTTTTTATGAGTCTCGTGGCCGAAAA-TTGAGGAAAATTATTTCGGGTCAATTTTTACAAA
* * * * *
65986 ATTTTAGCTGAAATCGGTGTACTAACTATCACGGTTTTTGGCAAAAAAAAACGTGTTCTAGG-GT
259 ATTTTAGCCGAAATC-GTGTACTAACTATCACGGTTTTTGGC---TAAAAACGCGTTC-CGGAGC
* * * *
66050 CCCGGCTTAGTTTTGCATGATTTTTGGCATCC-AGACTCATTGAAATATCTATATTTATCTAACC
319 CCCGGCTCAGTTTTGCATGATTTTTGGC-GCCAAGACTAATTGAAATATCTATATTTATCTAACG
* ** * * * * *
66114 AAATCTCAACCACATTGGATTTAAATATTTGTTTTTACGAGCGTATGAATCATGTTTCGATTCAA
383 AAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAATC-GGTTTCGATTTAA
* * ** *
66179 TCAGGAATTAATTCGGAAAAAATAG-AAA-AAATTATATTCGAAGCGTGA-ATAG-CATTTCAAT
447 TTAGAAATTAATTC-GAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGA-AGCCA-TTCAAT
* * * * *
66240 CTTTTT-G-GTATGAATTATATATTTTTTATGACTATTGTGGCTGAAAATTGAGGAAATTTATTT
509 CTTTTTGGCGT-TGAATTATATA-TTTTTATGAATGTGGTGGCCGAAAATTGAGGAAAATT-TTT
* *
66303 TGGGTCAATTTTTGCAAAATTTTAGCCGAAATCGTGTAGCCTAGCCTATCAC-AGTTTTTG-GCT
571 CGGGTCAATTTTTGCAAAATTTTAGCCGAAATCGTGTA--CTA-ACTATCACGA-TTTTTGAG-T
* *
66366 AAAAACGCGTTC-CGGGGCCCCGACACAGTTTT
631 AAAAACGCGTTCTC-GGGCCCCGGCTCAGTTTT
* * * * * * *
66398 GCATGATTTTTGACGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATATCAGCCACAT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * * ** *
66463 TGGATTTAAGGATTTGTTTTTACGAGCATCTCAATCCGGTTTCGATTTC-ATTAGAAATTAATTC
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGA-TTCAATTAGGAATTAATTC
* ** * * **
66527 -AAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGA-AGCCATTCAATCTTTTTGGCATTGAA
130 GGAAAAAATAG-AAA-AAATGATATTAGAAGCATGA-ATAGCCTTTCAATCTTTTTGGTGTTGAA
* * * * * * * *
66590 TTATACATTTTTAATGAATGTGGTGGCCGGAAATTGAGGAGAAATT-TCTCGGGTCAATTTTTGC
192 TTATATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGA-AAATTATTTCGGGTCAATTTTTAC
* * * *
66654 AAAATTTTAGCTGAAATCGTGTACGT---TATCACGATTTTTGAG-TAAAATCGCGTTCCGGACC
256 AAAATTTTAGCCGAAATCGTGTAC-TAACTATCACGGTTTTTG-GCTAAAAACGCGTTCCGGAGC
* * * ** *
66715 CCCGGCTCAGTATTGCACGATTTTTGGCGCCAAGTCTAATTGAAATATCTATATCAATCTAACCA
319 CCCGGCTCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAA-CG
* ** * * * * * * *
66780 AAAT-T-ACCCATGTTGGATTTAAAGATTAGTTTTTACGAGCATTTGAATTGTGTTTCGGTTGAA
383 AAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAATCG-GTTTCGATTTAA
* * * ** * * * *
66843 TTAGGAATTATTTCGGAAAAAATAG-GAA-AAATGATATTGGAAGCATGA-ATAGTCTTTCAATC
447 TTAGAAATTAATTC-GAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGA-AGCCATTCAATC
* * ***
66905 TTTTTGGTGTTGAATTATATATTTTTTATGAGTCCCGTGGCCGAAAATTGAGGAAAATTATTTCG
510 TTTTTGGCGTTGAATTATATA-TTTTTATGAATGTGGTGGCCGAAAATTGAGGAAAATT-TTTCG
* * * * *
66970 GGTGAATTTGTACAAAATTTTTGCCGAAATCGTGTACGT---TATCACGGTTTTTG-GCTAAAAA
573 GGTCAATTTTTGCAAAATTTTAGCCGAAATCGTGTAC-TAACTATCACGATTTTTGAG-TAAAAA
*
67031 CGCGTTC-CGGGGACCCGGCTCAGTTTT
636 CGCGTTCTC-GGGCCCCGGCTCAGTTTT
* * * * * * *
67058 GCATGATTTTTGGCGCCAAGAATTATTGGAACATCTATATTTATCTAACAAAATCTCAGCCACGT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * * * * *
67123 TGGATTTAAGGATTTGTTTTTACGAGCATCTCAAT--TCGATTTCAATTTAATTAGAAATTAATT
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCAT-G-TTTCGATTCAATTAGGAATTAATT
** * * * **
67186 CGGAAAAAATAGAAAAAACAATATTAGAAGCGTGAGA-AACCCTTCAATCTTTTTGACGTTGAAT
129 CGGAAAAAATAGAAAAAATGATATTAGAAGCATGA-ATAGCCTTTCAATCTTTTTGGTGTTGAAT
* * * * * * * * *
67250 TATATATTTTCTATGAGTATTGTGG-CTAAAAGTTGTGGGAAATTCTTTCTGGTCAAGTTTTACA
193 TATATATTTTTTATGAGTCTCGTGGCCGAAAA-TTGAGGAAAATTATTTCGGGTCAATTTTTACA
* * *
67314 AAATTTTAGCCGAAATCGGTGTAC--ACTATCACGATTTTTGGCAAAAAACGCGTTCTAGG-GCC
257 AAATTTTAGCCGAAATC-GTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTTC-CGGAGCC
* * * * * *
67376 CCGGTTCAGTTTTTCATGATTTTTGGCGTCAAGATTCATTGAAATATCTATAGTTATCTAACGAA
320 CCGGCTCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAA
*
67441 AACTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAATCCGGTTTCGATTTAATT
385 ATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAAT-CGGTTTCGATTTAATT
*
67506 AGAAATTAATTC-AAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAATCCATTCAATCTTTT
449 AGAAATTAATTCGAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTT
** * * * *
67570 TCACGTTGAATTATACATTTTTAATGAATGTGGTGGCCGGAAATTGAGGGGAAATTTCTCGGGTC
514 TGGCGTTGAATTATATATTTTT-ATGAATGTGGTGGCCGAAAATTGA-GGAAAATTTTTCGGGTC
* *
67635 AATTTTTGCAAAATTTTAGCCTAAATCGTGTACTAACTATCACGATTTTTGAGTAAAATCGCGTT
577 AATTTTTGCAAAATTTTAGCCGAAATCGTGTACTAACTATCACGATTTTTGAGTAAAAACGCGTT
* *
67700 C-CGGACCCCCGGCTCAGTCTT
642 CTCGG-GCCCCGGCTCAGTTTT
* * * * * *
67721 GCACGATTTTTGGCACCAAGTCTCATTGAAATATCTATATCAATCTAACCAAATCTTACCCATGT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * ** * *
67786 TGGATTTAAAGATTTCTTTTTACCAGCATATGAATTGTGTTTCGGTTGAATTAGGAATT-ATTCG
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
* * * * *
67850 GAAAAAATAGGAAAATTGATATTGGAAGCATGAATAGTCTTTCAATCTTTTTGGTGTTCAATTAT
131 GAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTAT
* * *
67915 ATATTTTTTATGAGTCCCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTGAATTTTTACAAAAT
196 ATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAAAT
* * *
67980 TTTAGCCGAAATTGTGTACGT---TATCACGGTTTTTGGCTAAAAACGCGTTCTAGG-GACCCGG
261 TTTAGCCGAAATCGTGTAC-TAACTATCACGGTTTTTGGCTAAAAACGCGTTC-CGGAGCCCCGG
* * * * *
68041 CTCAGTTTTGCATGATTTTGGGCGCCAAGAATTATT-AGAACATCTATATTTATCTAACAAAATC
324 CTCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGA-AATATCTATATTTATCTAACGAAATC
* * * *
68105 TCAGCCACGTTGGATTTAAGCATTTGTTTTTACGAGCATCTCAATTCGATTTCGATTTAATTGGA
388 TCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAA-TCGGTTTCGATTTAATTAGA
* *
68170 AATTAATTCGAAATAATAGAAAA-AAACAATATTAGAAGCGTGAGAAGCCTTTCAATCTTTTTGG
452 AATTAATTCGAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGG
* * * * * *
68234 CGTTGAATTATATATTTTTTATGAGTATTGTGG-CTAAAAGTTGTGGAAAATTCTTTCTGGTCAA
517 CGTTGAATTATATA-TTTTTATGAATGTGGTGGCCGAAAA-TTGAGGAAAATT-TTTCGGGTCAA
* * * * *
68298 TTTTTACAAAAATTTTAGCCGAAATCGGTGTGTAGTAA-TATCACGGTTTTTG-GCAAAAAAATG
579 TTTTTGC-AAAATTTTAGCCGAAATC---GTGTACTAACTATCACGATTTTTGAG--TAAAAACG
* *
68361 CGTTCTAGGGCCCCGACTCAGTTTT
638 CGTTCTCGGGCCCCGGCTCAGTTTT
* * * *
68386 GGACGATTTTTGGCGTCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACAT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * * *
68451 TGGATTTAAATATTTGTTTTTTCGAGCGTATGAATCATGTTTCGATTCAATTAGGAATTAATTCC
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
* * * * * **
68516 G-AAAAAGAGAAAAAATTATATTAGACGCGTGAATAGCATTTCAATCTTTTTGGAATTGAATTAT
131 GAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTAT
* * * * *** *
68580 ATATTTTGTATGACTATCGTGGCCAAAAATTGAGGAAAATTATTTTTTGTCAATTTTT-TAAAAT
196 ATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAAAT
* * * *
68644 TTTAGCCGAAATCGTGTACTAACTAACACTGTTTTTGTCTAAAAACGCGTTCCGGGGCCCCGGCA
261 TTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCCCGGC-
* * *
68709 T-AGTTCTGCATGATTTTTGGCGCCAAGACTAATTGAAATTTCTATATTTATCTAGCGAAATCTC
325 TCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATCTC
* *
68773 AACCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAATCCGGTTTCGAATTAATTAGAAA
390 AGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAAT-CGGTTTCGATTTAATTAGAAA
* * *
68838 TTAATTCAAAAAAAATAGAAAACAAACAATATTAGAAACGTGAGAAGCCATTCAATCTTTTTAGC
454 TTAATTC-GAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGC
* * * *
68903 GTTGAATTATACATTTTTAATGAATGTGGTGGCCGCAAATTGAGGTTAAATTTCTT-GGGTTAAT
518 GTTGAATTATATATTTTT-ATGAATGTGGTGGCCGAAAATTGAGG-AAAATTT-TTCGGGTCAAT
* * * * *
68967 TTTTGCAAAATTTTAACTGAAATCATGTACTAACCATCACGATATTTGAGTAAAAACGCGTTC-C
580 TTTTGCAAAATTTTAGCCGAAATCGTGTACTAACTATCACGATTTTTGAGTAAAAACGCGTTCTC
*
69031 GGACCTCCGGCTCAGTTTT
645 GGGCC-CCGGCTCAGTTTT
* * * * * * * * *
69050 GCACAATTATTGGGGCCAAGTCTCATTGACATATCTATATCAATCTAACCAAATCTTACCCATGT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * * *
69115 TGGATTTAAAGATTTCTTTTTACCAGCATATGAATCGTGTTTCAATTCAATTAGGAATTAATTCG
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
* * * * * *
69180 GAAAAAATAGGAAAAATGATATTGGAAGCATGAATAGCCTTTCAATCTTTTTGTTATTTAACTAT
131 GAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTAT
* * *
69245 ATATTTTTTATGAGTCCCGTGGCCGAAAATTGAGGAAAATTCTTTCGGGTGAATTTTTACAAAAT
196 ATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAAAT
* * * *
69310 TTTAGCCGAAATCGTGGACGT---TATCATGGTTTTTGGCTAAAAACGCGTTTC-GAGGACCCGG
261 TTTAGCCGAAATCGTGTAC-TAACTATCACGGTTTTTGGCTAAAAACGCGTTCCGGA-GCCCCGG
* * * * *
69371 CTCAATTTTGCATGATTTTTGGCGCCAAGACTTATTGAAACATCTATATTTATGTAACAAAATCT
324 CTCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATCT
* * **
69436 CGGCCACGTTGGATTTAAGGATTTGTTTTTACGAGCATCTCAATTCAATTTCGATTTAATTAGAA
389 CAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAA-TCGGTTTCGATTTAATTAGAA
* * * *
69501 ATTAATTCGGAAAAAATAG-AAATAAACAATATTAGAAGCGTGAGAAGCCCTTCAATATTTTTGA
453 ATTAATTC-GAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGG
* * * ** * * *
69565 CGTTGAATTATATATTTTTTATGAGTATTGTGGCTAAAAATTGTGGAAATTTCTTTCTGGTCAAT
517 CGTTGAATTATATA-TTTTTATGAATGTGGTGGCCGAAAATTGAGGAAAATT-TTTCGGGTCAAT
* * * * ** *
69630 TTTTACAAAATTTTAGCCGAAATCGGCGTACGTTA-TATCACGGTTTTTGGCAAAAAAAAAACGT
580 TTTTGCAAAATTTTAGCCGAAATC-GTGTAC-TAACTATCACGATTTTT-G---AGTAAAAACGC
**
69694 GTTCTAAGG-CCCGGCTCAGTTTT
639 GTTCTCGGGCCCCGGCTCAGTTTT
* * * *
69717 GCATGATTTTTGGCGTCAAGACTCATTGAAATATCTATATTTATCTAACCAAATCTCAGCCACAT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * *
69782 TGGATTTAAATATTTGTTTTTACGAGCGTATGAATCATGTTTCGATTCAATTACGAATTAATTCG
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
* * * * ** *
69847 GAAAAAGTAGGAAAAATGATATTAGAAGCGTGAATAGCATTTCAATCTTTTTGGAATCGAATTAT
131 GAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTAT
* * * * * *
69912 ATATTTTTTTATGACTATCGTGGCCAAAAATTGAGGAAAATTCTTTTGTGTCAATTTTTGA-AAA
196 ATA-TTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTT-ACAAA
* * *
69976 ATTATAGCCGAAATCATGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTACCGTG-GCCCCG
259 ATTTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTTCCG-GAGCCCCG
* *
70040 GCTCAGGTTTGCATGATTCTTGGCGCCAAGACTAATTGAAATATTACTGTAAAAAAAGACTAATT
323 GCTCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATA-T-C--T--------A-T-ATT
* *
70105 GAAATATCTATATTTATTTAGCGAAATCTCAGCCACATTGGATTTAAGGGTTTGTTTTTATGAGC
374 ----TATC------TA---A-CGAAATCTCAGCCACATTGGATTTAAGGATTTGTTTTTACGAGC
* * *
70170 ATTTCAATCTGATTTCGATTTAATTAGAAATTAATTCAAAAAAATAGAAAACAAACAATATTAGA
425 ATCTCAATC-GGTTTCGATTTAATTAGAAATTAATTCGAAAAAATAGAAAACAAACAATATTAGA
* * *
70235 AGCGTGAAAAGCCATTCAA--TTTTTGGCGTTGAATTATACATTTTTAATGAATGTGGTGGCCGG
489 AGCGTGAGAAGCCATTCAATCTTTTTGGCGTTGAATTATATATTTTT-ATGAATGTGGTGGCCGA
* * *
70298 AAATTGAGGAGAAATTTCTCGGGTCAATTTTTGCAAAATTTTAGCTGAAATCGTGTACTAACCAT
553 AAATTGAGGA-AAATTTTTCGGGTCAATTTTTGCAAAATTTTAGCCGAAATCGTGTACTAACTAT
* * **
70363 CACGATTTTTGAGTAAAAACGTGTTCT-GGACCCCCGGCTCAGACTT
617 CACGATTTTTGAGTAAAAACGCGTTCTCGG-GCCCCGGCTCAGTTTT
* * * * * *
70409 GCACGATTTTTGGTGCCAAGTCTCTTTGAAATATCTATATCCATCTAACCAAATCTTACCCACGT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* *
70474 TGGATTTAAAGATTTGCTTTTACGAGCATATGAATCATGTTTCGGTTCAATTAGGAATTAATTCG
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
* * *
70539 GAAAAAATAGGAAAAATGATATTGGAAGCATGAATAGCCTTTCAATCTTTTTGGTCTTGAATTAT
131 GAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTAT
* * *
70604 ATATTTTTTACGAGTCTCGTTGCCGAAAATTGAGGAAATTTATTTCGGGTCAATTTTTGA-AAAA
196 ATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTT-ACAAAA
* * * * * *
70668 TTTTAGCCGAAATCGTATACTAACTATCACAGTTTTTGG-TTAAAACGCGTTTCGGGGCCCCGAC
260 TTTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCCCGGC
* * *
70732 TCAGTTTTGCTTGATTTTTGGCGCCAAGACTAATTGAAATACCTATATTTATCTAGCGAAATCTC
325 TCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATCTC
* * * *
70797 AACCACATTAGATTTAAGGATTTGTTTTTACGAACATCTCAATCCGGTTTCGATTAAATTAGAAA
390 AGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAAT-CGGTTTCGATTTAATTAGAAA
*
70862 TTAATTCAAAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGC
454 TTAATTC-GAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGC
* * *
70927 GTTGAATTATACATTTTTAATGAATGTGGTGGCCGCAAATTGAGGAGAAATTTCTCGGGTCAATT
518 GTTGAATTATATATTTTT-ATGAATGTGGTGGCCGAAAATTGAGGA-AAATTTTTCGGGTCAATT
* * * *
70992 TTTGCAAAATTTTAGCTGAAATCGTGTACTAACCATCACGATTTTTGAGTGAAAACGTGTTC-CG
581 TTTGCAAAATTTTAGCCGAAATCGTGTACTAACTATCACGATTTTTGAGTAAAAACGCGTTCTCG
* * * *
71056 GATCTCCAGCTCAGTCTT
646 G-GCCCCGGCTCAGTTTT
* * * * *
71074 GCACGATTTTTGGCGCCAAGTCTCTTTGAAATATCTATATCCATCTAACCAAATCTTATCCACGT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* *
71139 TGGATTTAAAGATTTGCTTTTACGAGCATATGAATCATGTTTCGGTTCAATTAGGAATTAATTCG
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
** * *
71204 GAAAAAATAGGTAAAATGATATTGGAAGCATGAATAGCCTTTCAATCTTTTTGGTCTTGAATTAT
131 GAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTAT
* * * * *
71269 ATACTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAATTTATTTCAGGTCAATTTTTGCGAAAT
196 ATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAAAT
* * * * * *
71334 TTTAGCCGAAATCTTGTAC--ATTATCACGGTTTTTGGCTAAAAACGCGTTTCGGGGTCCCAGCT
261 TTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCCCGGCT
* * *
71397 CAATTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATACCTATATTTATCTAGCGAAATCTCA
326 CAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATCTCA
71462 GCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAATCCGGTTTCGATTTAATTAGAAAT
391 GCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAAT-CGGTTTCGATTTAATTAGAAAT
* *
71527 TAATTCAAAAAAAAATTGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATC-TTTTGGC
455 TAATTC--GAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGC
* * *
71591 GTTGAATTATACATTTTTAATGAATGTGGTGGCCGCAAATTGAGGAGAAATTTCTCGGGTCAATT
518 GTTGAATTATATATTTTT-ATGAATGTGGTGGCCGAAAATTGAGGA-AAATTTTTCGGGTCAATT
* *
71656 TTTGCAAAATTTTAGCTGAAATCGTGTACTAACTATCACGATTTTTGAGTAAAAACGTGTTC-CG
581 TTTGCAAAATTTTAGCCGAAATCGTGTACTAACTATCACGATTTTTGAGTAAAAACGCGTTCTCG
* * *
71720 GACCCCCAGCTCAGTCTT
646 G-GCCCCGGCTCAGTTTT
* * * * *
71738 GCACGATTTTTGGCGCCAAGTCTCTTTGAAATATCTATATCCATCTAACCAAATCTTACCCACGT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* *
71803 TGGATTTAAAGATTTGCTTTTACGAGCATATGAATCATGTTTCGGTTCAATTAGGAATTAATTCG
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
* * *
71868 GAAAAAATAGGAAAAATGATATTGGAAGCATGAATAGCCTTTCAATCTTTTTGGTCTTGAATTAT
131 GAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTAT
* * * *
71933 ATACTTTTTATGAGTCCCGTGGCCGAAAATTGAGGAAATTTATTTCGGGTCAATTTTTGCAAAAT
196 ATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAAAT
* * * **
71998 TTTAGCCGAAATCGTATACTAACTATCACGGTTTTTGGCTAGAAAACGCGTTTCGGGGCCCTAGC
261 TTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTA-AAAACGCGTTCCGGAGCCCCGGC
* * *
72063 TCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTTAAATACCTATATTTATCTAGCGAAATCTC
325 TCAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATCTC
72128 AGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAATCCGGTTTCGATTTAATTAGAAA
390 AGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAAT-CGGTTTCGATTTAATTAGAAA
*
72193 TTAATTCAAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGCG
454 TTAATTCGAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGCG
* * *
72258 TTGAATTATACATTTTTAATGAATGTGGTGGCCGCAAATTGAGGAGAAATTTCTCGGGTCAATTT
519 TTGAATTATATATTTTT-ATGAATGTGGTGGCCGAAAATTGAGGA-AAATTTTTCGGGTCAATTT
* ** * *
72323 TTTCAAAATTTTAGTTGAAATCGTGTACTAACCATCACGATTTTTGAGTAAAAACGTGTTCT-GG
582 TTGCAAAATTTTAGCCGAAATCGTGTACTAACTATCACGATTTTTGAGTAAAAACGCGTTCTCGG
* * *
72387 ACCCCAGCTCAGTCTT
647 GCCCCGGCTCAGTTTT
* * * * *
72403 GCACGATTTTTGGCGCCAAGTCTCTTTGAAATATCTATATCCATCTAACCAAATCTTACCCACGT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* *
72468 TGGATTTAAAGATTTGCTTTTACGAGCATATGAATCATGTTTCGGTTCAATTAGGAATTAATTCG
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
** * * *
72533 GAAAAAATAGGTAAAATGATATTGGAAGCATGAATAGCTTTTCAATTTTTTTGGTGTTGAATTAT
131 GAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTAT
* * * * *
72598 ATATTTTTTATGAGTCTCGTCGCCGAAAATTGAGGAAATTTATTTCAGGTGAATTTTTATAAAAT
196 ATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAAAT
* * * * *
72663 TTTAGCCGAAATCTTGTAC--ATTATCACGGTTTTTGGCTAAAAATGCGTTCCGCG-GACCCGAC
261 TTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTTCCG-GAGCCCCGGC
** * * * *
72725 TCAGTTTTGCATGATTTTTTTACGCCAAGACTTATTGAAACATCTATATTTATTTAACAAAATCT
325 TCAGTTTTGCATGA-TTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATCT
* * * *
72790 CAGCCACTTTGGATTTAAGAATTTATTTTTACGAGCATCTCAATTCGATTTCGATTTAATTAGAA
389 CAGCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAA-TCGGTTTCGATTTAATTAGAA
* *
72855 ATTAATTCAGAAAAAATAGAAAA-AAACAATATTAGAAGCGTGAGAAGCCCTTCAATTTTTTTGG
453 ATTAATTC-GAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGG
* * * * * * *
72919 TGTTGAATTATATATTTTTTATGAGTATTGTGG-CTAAAAGTTGTGGAAAATTCTTTCTGGTCAA
517 CGTTGAATTATATA-TTTTTATGAATGTGGTGGCCGAAAA-TTGAGGAAAATT-TTTCGGGTCAA
* * * *
72983 TTTTTACAAAATTTTAGCCAAAATCGGTGTACTAACTATCACGGTTTTTGGCAATAAAAAAACGC
579 TTTTTGCAAAATTTTAGCCGAAATC-GTGTACTAACTATCACGATTTTT-G-AGT--AAAAACGC
* *
73048 GTTCTAGGGCCCCGGCTCAATTTT
639 GTTCTCGGGCCCCGGCTCAGTTTT
* * * * * * *
73072 GCATGATTTTTGGCGTCAAGACTCGTTGAAATATCTATATTTATCTGACAAAATCTCAGCCACAT
1 GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
* * * *
73137 TGGATTTAAATATTTGTTTTTACGAGCTTGTGAATCATGTTTCGATTCAATTAGGAGTTAATTCG
66 TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
* *
73202 GAAAAAATAGAAAAAATGATATTAGAAGCGTGAATAGCATTTCAATC---------TT---TT-T
131 GAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTAT
* * * * ** * *
73254 ATA-TTTTT-TGTGTATCGTGGCCAAAAATTGAGGAAAATTCTTTTTGGTTAATTTTTGCAAAA-
196 ATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAAAT
73316 TTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTT
261 TTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTT
73367 TTGGTCAATA
Statistics
Matches: 9359, Mismatches: 1322, Indels: 568
0.83 0.12 0.05
Matches are distributed among these distances:
653 18 0.00
654 43 0.00
655 147 0.02
656 391 0.04
657 202 0.02
658 108 0.01
659 125 0.01
660 267 0.03
661 461 0.05
662 555 0.06
663 1024 0.11
664 1328 0.14
665 1671 0.18
666 510 0.05
667 585 0.06
668 251 0.03
669 244 0.03
670 298 0.03
671 195 0.02
672 66 0.01
674 14 0.00
675 1 0.00
676 3 0.00
677 1 0.00
678 1 0.00
679 161 0.02
680 113 0.01
681 1 0.00
682 1 0.00
683 1 0.00
684 3 0.00
686 1 0.00
688 4 0.00
689 1 0.00
690 58 0.01
691 101 0.01
692 188 0.02
694 5 0.00
695 21 0.00
696 71 0.01
697 16 0.00
698 104 0.01
ACGTcount: A:0.32, C:0.15, G:0.18, T:0.36
Consensus pattern (662 bp):
GCACGATTTTTGGCGCCAAGACTCATTGAAATATCTATATCTATCTAACCAAATCTCAGCCACGT
TGGATTTAAAGATTTGTTTTTACGAGCATATGAATCATGTTTCGATTCAATTAGGAATTAATTCG
GAAAAAATAGAAAAAATGATATTAGAAGCATGAATAGCCTTTCAATCTTTTTGGTGTTGAATTAT
ATATTTTTTATGAGTCTCGTGGCCGAAAATTGAGGAAAATTATTTCGGGTCAATTTTTACAAAAT
TTTAGCCGAAATCGTGTACTAACTATCACGGTTTTTGGCTAAAAACGCGTTCCGGAGCCCCGGCT
CAGTTTTGCATGATTTTTGGCGCCAAGACTAATTGAAATATCTATATTTATCTAACGAAATCTCA
GCCACATTGGATTTAAGGATTTGTTTTTACGAGCATCTCAATCGGTTTCGATTTAATTAGAAATT
AATTCGAAAAAATAGAAAACAAACAATATTAGAAGCGTGAGAAGCCATTCAATCTTTTTGGCGTT
GAATTATATATTTTTATGAATGTGGTGGCCGAAAATTGAGGAAAATTTTTCGGGTCAATTTTTGC
AAAATTTTAGCCGAAATCGTGTACTAACTATCACGATTTTTGAGTAAAAACGCGTTCTCGGGCCC
CGGCTCAGTTTT
Found at i:73550 original size:1 final size:1
Alignment explanation
Indices: 73544--73572 Score: 58
Period size: 1 Copynumber: 29.0 Consensus size: 1
73534 TTTGGGCGAA
73544 TTTTTTTTTTTTTTTTTTTTTTTTTTTTT
1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTT
73573 GTGTTTACTC
Statistics
Matches: 28, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
1 28 1.00
ACGTcount: A:0.00, C:0.00, G:0.00, T:1.00
Consensus pattern (1 bp):
T
Found at i:73785 original size:23 final size:23
Alignment explanation
Indices: 73757--73828 Score: 108
Period size: 23 Copynumber: 3.1 Consensus size: 23
73747 TCTTTGTTTA
*
73757 TTTTGGAACTCCTTTGTGAGAGT
1 TTTTGGAACTCCTTTGTGAGAGC
* *
73780 TTTTGGTACTCTTTTGTGAGAGC
1 TTTTGGAACTCCTTTGTGAGAGC
*
73803 TTTTGAAACTCCTTTGTGAGAGC
1 TTTTGGAACTCCTTTGTGAGAGC
73826 TTT
1 TTT
73829 GTTTATTGTC
Statistics
Matches: 43, Mismatches: 6, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
23 43 1.00
ACGTcount: A:0.17, C:0.14, G:0.24, T:0.46
Consensus pattern (23 bp):
TTTTGGAACTCCTTTGTGAGAGC
Found at i:78734 original size:39 final size:38
Alignment explanation
Indices: 78679--78752 Score: 121
Period size: 39 Copynumber: 1.9 Consensus size: 38
78669 CATTTGTGTT
*
78679 TCGGAAACAAGAGAGGCGGCGACAGAGAGAAGAGAGTTA
1 TCGGAAACAAGAGAGGCGGCGACAAAGAG-AGAGAGTTA
*
78718 TCGGAAACAAGGGAGGCGGCGACAAAGAGAGAGAG
1 TCGGAAACAAGAGAGGCGGCGACAAAGAGAGAGAG
78753 GGAAGGTACC
Statistics
Matches: 33, Mismatches: 2, Indels: 1
0.92 0.06 0.03
Matches are distributed among these distances:
38 6 0.18
39 27 0.82
ACGTcount: A:0.41, C:0.14, G:0.41, T:0.05
Consensus pattern (38 bp):
TCGGAAACAAGAGAGGCGGCGACAAAGAGAGAGAGTTA
Found at i:79534 original size:26 final size:26
Alignment explanation
Indices: 79505--79556 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
79495 AATTCTTGTA
79505 GCAATCACTTCATGTTTCTAACTTTC
1 GCAATCACTTCATGTTTCTAACTTTC
* * *
79531 GCAATGACTTCCTGTTTCTACCTTTC
1 GCAATCACTTCATGTTTCTAACTTTC
79557 TTATTTCTCA
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.19, C:0.29, G:0.10, T:0.42
Consensus pattern (26 bp):
GCAATCACTTCATGTTTCTAACTTTC
Found at i:85549 original size:20 final size:20
Alignment explanation
Indices: 85524--85566 Score: 86
Period size: 20 Copynumber: 2.1 Consensus size: 20
85514 TCTGCACAAC
85524 AAGGCGAACAAAATAAGTAA
1 AAGGCGAACAAAATAAGTAA
85544 AAGGCGAACAAAATAAGTAA
1 AAGGCGAACAAAATAAGTAA
85564 AAG
1 AAG
85567 ATCAAAACAC
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
20 23 1.00
ACGTcount: A:0.60, C:0.09, G:0.21, T:0.09
Consensus pattern (20 bp):
AAGGCGAACAAAATAAGTAA
Found at i:100456 original size:33 final size:35
Alignment explanation
Indices: 100373--100468 Score: 115
Period size: 33 Copynumber: 2.7 Consensus size: 35
100363 TCCCCTGTCT
* *
100373 TCTTTGACTTGTCTTCTGAAACCAAACTTTGTTCCCCTG
1 TCTTTGAGTTGTCTTCTGAAACCAAAC--T-TT-CACTG
*
100412 TATTTGAGTTGTCTTCTGAAACCAAAC-TT-ACTG
1 TCTTTGAGTTGTCTTCTGAAACCAAACTTTCACTG
100445 TCTTTGAGTTGTCTTCTGAAACCA
1 TCTTTGAGTTGTCTTCTGAAACCA
100469 GAGCCATCTT
Statistics
Matches: 53, Mismatches: 4, Indels: 6
0.84 0.06 0.10
Matches are distributed among these distances:
33 26 0.49
35 2 0.04
39 25 0.47
ACGTcount: A:0.22, C:0.23, G:0.15, T:0.41
Consensus pattern (35 bp):
TCTTTGAGTTGTCTTCTGAAACCAAACTTTCACTG
Found at i:101608 original size:33 final size:33
Alignment explanation
Indices: 101571--101657 Score: 165
Period size: 33 Copynumber: 2.6 Consensus size: 33
101561 GGTATTATTG
101571 ACGTGACAATGCCATATCGAATAAAAAATTATC
1 ACGTGACAATGCCATATCGAATAAAAAATTATC
101604 ACGTGACAATGCCATATCGAATAAAAAATTATC
1 ACGTGACAATGCCATATCGAATAAAAAATTATC
*
101637 ACGTGACAATGCCATGTCGAA
1 ACGTGACAATGCCATATCGAA
101658 CCAAGACGTT
Statistics
Matches: 53, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
33 53 1.00
ACGTcount: A:0.43, C:0.20, G:0.15, T:0.23
Consensus pattern (33 bp):
ACGTGACAATGCCATATCGAATAAAAAATTATC
Found at i:102675 original size:14 final size:14
Alignment explanation
Indices: 102656--102683 Score: 56
Period size: 14 Copynumber: 2.0 Consensus size: 14
102646 TTTAATTATA
102656 AAAAATTATATTTT
1 AAAAATTATATTTT
102670 AAAAATTATATTTT
1 AAAAATTATATTTT
102684 GATTAAGTTA
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 14 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (14 bp):
AAAAATTATATTTT
Found at i:109318 original size:48 final size:48
Alignment explanation
Indices: 109261--109394 Score: 207
Period size: 48 Copynumber: 2.8 Consensus size: 48
109251 TTTTTCCCCT
* *
109261 GTCTCTGAGTTGTCTGTTGAAACCAAACCCATCTTTTGTTC-CCTGGTG
1 GTCTCTGAGTTGTCTGCTGAAACCAAACCCATCTTTTGTTCTCC-GGTA
*
109309 GTCTCTGAGTTGTCTGCTGAAACCAAACCCTTCTTTTGTTCTCCGGTA
1 GTCTCTGAGTTGTCTGCTGAAACCAAACCCATCTTTTGTTCTCCGGTA
* *
109357 GTCTCTGAGTCGTCTGCTGGAACCAAACCCATCTTTTG
1 GTCTCTGAGTTGTCTGCTGAAACCAAACCCATCTTTTG
109395 GAGTAAGTTG
Statistics
Matches: 79, Mismatches: 6, Indels: 2
0.91 0.07 0.02
Matches are distributed among these distances:
48 77 0.97
49 2 0.03
ACGTcount: A:0.17, C:0.27, G:0.20, T:0.36
Consensus pattern (48 bp):
GTCTCTGAGTTGTCTGCTGAAACCAAACCCATCTTTTGTTCTCCGGTA
Found at i:109810 original size:2 final size:2
Alignment explanation
Indices: 109803--109840 Score: 76
Period size: 2 Copynumber: 19.0 Consensus size: 2
109793 TAATGATGCT
109803 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
Statistics
Matches: 36, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 36 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
TA
Done.